EvolveFNN: An Interpretable Framework for Early Detection Using Longitudinal Electronic Health Record Data

IF 6.8 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS IEEE Journal of Biomedical and Health Informatics Pub Date : 2025-03-14 DOI:10.1109/JBHI.2025.3551312
Yufeng Zhang;Emily Wittrup;Matthew Hodgman;Michael Mathis;Kayvan Najarian
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Abstract

The extensive adoption of artificial intelligence in clinical decision support systems requires greater model interpretability. Hence, we introduce EvolveFNN, an interpretable model based on the recurrent neural network that merges fuzzy logic principles with recurrent units. This model is designed to train precise and understandable models using high-dimensional longitudinal electronic health records data. Through supervised learning, our method allows the identification of variable encoding functions and significant rules. To demonstrate performance and capabilities in classification and rule discovery, we first test our method on a simulated dataset. The proposed methods achieve the best model performance compared to other methods, and the rules learned are almost identical to what we used to generate the synthetic data. Furthermore, we showcase a pilot application that proves its potential in the early detection of cardiac event onset. Our proposed algorithm obtains a comparable model performance to vanilla GRU models and remains relatively stable when the prediction window size changes. Examining the rules generated by our proposed model, we find that the extracted rules not only align with clinical practices and existing literature but also provide potential risk factors not explored in the population. The additional experiments on the MIMIC-III benchmark dataset show the algorithm's generalizability. In conclusion, our proposed approach can effectively train accurate, interpretable, and reliable models using large longitudinal electronic health records, offering clinicians valuable insights.
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EvolveFNN:利用纵向电子健康记录数据进行早期检测的可解释框架。
人工智能在临床决策支持系统中的广泛应用需要更高的模型可解释性。因此,我们引入了EvolveFNN,这是一种基于递归神经网络的可解释模型,它将模糊逻辑原理与递归单元融合在一起。该模型旨在使用高维纵向电子健康记录数据训练精确和可理解的模型。通过监督学习,我们的方法可以识别变量编码函数和重要规则。为了演示分类和规则发现方面的性能和能力,我们首先在一个模拟数据集上测试我们的方法。与其他方法相比,所提出的方法获得了最佳的模型性能,并且所学习的规则与我们用于生成合成数据的规则几乎相同。此外,我们展示了一个试点应用,证明了它在早期检测心脏事件发作的潜力。我们提出的算法获得了与普通GRU模型相当的模型性能,并且在预测窗口大小变化时保持相对稳定。检查我们提出的模型生成的规则,我们发现提取的规则不仅与临床实践和现有文献一致,而且还提供了未在人群中探索的潜在风险因素。在MIMIC-III基准数据集上的附加实验表明了该算法的泛化性。总之,我们提出的方法可以使用大型纵向电子健康记录有效地训练准确、可解释和可靠的模型,为临床医生提供有价值的见解。源代码可从https://github.com/kayvanlabs/EvolveFNN获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
IEEE Journal of Biomedical and Health Informatics
IEEE Journal of Biomedical and Health Informatics COMPUTER SCIENCE, INFORMATION SYSTEMS-COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
CiteScore
13.60
自引率
6.50%
发文量
1151
期刊介绍: IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.
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