Stabilization of the Ferryl═Oxoheme Form of Staphylococcus aureus IsdG by Electron Transfer from a Second-Sphere Tryptophan

IF 15.6 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Journal of the American Chemical Society Pub Date : 2025-03-17 DOI:10.1021/jacs.5c00453
Aarzoo Grover, Matthew A. Conger, Matthew D. Liptak
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Abstract

The ferryl heme forms of Staphylococcus aureus IsdG and IsdI have novel UV/vis absorption spectra that are distinct from those of the three forms of ferryl heme typically found in biological systems: compound I, compound II, and compound ES. In this work, the ferryl heme form of IsdG was characterized because it is an analogue for the immediate product of enzyme-catalyzed heme hydroxylation. The ferryl heme form of IsdG generated following the addition of meta-chloroperoxybenzoic acid to the ferric heme form of IsdG has a half-life of 4.0 ± 0.2 min, which is more than 100 times longer than the half-life for the ferryl heme form of human heme oxygenase (hHO). Magnetic circular dichroism characterization of the IsdG species yielded spectral data and zero-field splitting parameters consistent with either a compound II- or compound ES-like ferryl heme. Further characterization of isotopically enriched samples with electron paramagnetic resonance spectroscopy revealed the presence of a protein-based organic radical, as would be expected for compound ES. Finally, multiscale quantum mechanics/molecular mechanics and time-dependent density functional theory strongly suggest that the ferryl heme form of IsdG has a ruffled porphyrin ligand and an oxo ligand. Thus, the ferryl heme form of IsdG is assigned to a compound ES-like species with a Trp67-based radical. Electron transfer from Trp67 to porphyrin will stabilize the immediate product of heme hydroxylation and provide a thermodynamic driving force for the reaction. Furthermore, the ability to transfer an electron between Trp67 and the substrate may explain the differential reactivity of meso-hydroxyheme in IsdG and hHO.

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从第二球色氨酸转移电子稳定金黄色葡萄球菌IsdG的铁基氧化血红素形式
金黄色葡萄球菌IsdG和IsdI的铁基血红素形式具有新的紫外/可见吸收光谱,不同于生物系统中常见的三种形式的铁基血红素:化合物I、化合物II和化合物ES。在这项工作中,IsdG的铁基血红素形式被表征,因为它是酶催化血红素羟基化的直接产物的类似物。在IsdG的铁血红素形式中加入间氯过氧苯甲酸生成的IsdG的铁血红素形式的半衰期为4.0±0.2 min,比人血红素加氧酶(hHO)的铁血红素形式的半衰期长100倍以上。IsdG的磁性圆二色性表征得到的光谱数据和零场分裂参数与化合物II-或化合物es -类铁酰血红素一致。利用电子顺磁共振光谱进一步表征同位素富集的样品,发现了一种基于蛋白质的有机自由基的存在,这与化合物ES的预期一致。最后,多尺度量子力学/分子力学和时变密度泛函理论有力地表明,IsdG的铁酰血红素形式具有皱褶卟啉配体和氧配体。因此,IsdG的铁酰血红素形式被分配到具有trp67基自由基的化合物es样物种。电子从Trp67转移到卟啉将稳定血红素羟基化的直接产物,并为反应提供热力学驱动力。此外,Trp67和底物之间转移电子的能力可能解释了IsdG和hHO中-羟血红素的不同反应性。
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来源期刊
CiteScore
24.40
自引率
6.00%
发文量
2398
审稿时长
1.6 months
期刊介绍: The flagship journal of the American Chemical Society, known as the Journal of the American Chemical Society (JACS), has been a prestigious publication since its establishment in 1879. It holds a preeminent position in the field of chemistry and related interdisciplinary sciences. JACS is committed to disseminating cutting-edge research papers, covering a wide range of topics, and encompasses approximately 19,000 pages of Articles, Communications, and Perspectives annually. With a weekly publication frequency, JACS plays a vital role in advancing the field of chemistry by providing essential research.
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