A dynamic block activation framework for continuum models.

IF 12 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Nature computational science Pub Date : 2025-03-17 DOI:10.1038/s43588-025-00780-2
Ruoyao Zhang, Yang Xia
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引用次数: 0

Abstract

Efficient utilization of massively parallel computing resources is crucial for advancing scientific understanding through complex simulations. However, existing adaptive methods often face challenges in implementation complexity and scalability on modern parallel hardware. Here we present dynamic block activation (DBA), an acceleration framework that can be applied to a broad range of continuum simulations by strategically allocating resources on the basis of the dynamic features of the physical model. By exploiting the hierarchical structure of parallel hardware and dynamically activating and deactivating computation blocks, DBA optimizes performance while maintaining accuracy. We demonstrate DBA's effectiveness through solving representative models spanning multiple scientific fields, including materials science, biophysics and fluid dynamics, achieving 216-816 central processing unit core-equivalent speedups on a single graphics processing unit (GPU), up to fivefold acceleration compared with highly optimized GPU code and nearly perfect scalability up to 32 GPUs. By addressing common challenges, such as divergent memory access, and reducing programming burden, DBA offers a promising approach to fully leverage massively parallel systems across multiple scientific computing domains.

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11.70
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A dynamic block activation framework for continuum models. Boosting crystal structure prediction via symmetry. Rapid traversal of vast chemical space using machine learning-guided docking screens. Celebrating a pioneer in bioinformatics. On the unknowable limits to prediction.
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