Illuminating potassium dynamics in endocytic pathways using FRET biosensors and computational tools

IF 3.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Sensors and Actuators B: Chemical Pub Date : 2025-03-22 DOI:10.1016/j.snb.2025.137668
Xiaoqi Hu , Kiseok Han , Gyuho Choi , Myungeun Suk , Tae-Jin Kim
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Abstract

Fluorescence resonance energy transfer (FRET)-based live-cell imaging and genetically encoded biosensors are widely used to study biochemical processes in living cells. However, there remains a gap in robust analytical methods for examining complex processes like endosomal trafficking. In this study, we introduce two advanced tools—EasyFRET and EndoAna—specifically designed for FRET image analysis, along with two novel potassium biosensors, GalT-KIRIN and KIRIN-Lamp1, targeted to endosomes and lysosomes, respectively. Together, these tools establish a comprehensive workflow for investigating potassium signaling, which plays a critical role in cellular homeostasis and various biological functions. Our live-cell imaging results demonstrate that EasyFRET and EndoAna provide efficient and reliable FRET image analysis, while the potassium indicators offer valuable insights into potassium dynamics within the endosomal trafficking system.

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利用FRET生物传感器和计算工具在胞吞途径中阐明钾动力学
基于荧光共振能量转移(FRET)的活细胞成像和基因编码生物传感器被广泛用于研究活细胞的生化过程。然而,在检查复杂过程(如内体贩运)的可靠分析方法方面仍然存在差距。在这项研究中,我们引入了两种先进的工具——easyfret和endoana——专门用于FRET图像分析,以及两种新型的钾生物传感器,GalT-KIRIN和KIRIN-Lamp1,分别针对核内体和溶酶体。总之,这些工具建立了一个全面的工作流程来研究钾信号,它在细胞稳态和各种生物功能中起着关键作用。我们的活细胞成像结果表明,EasyFRET和EndoAna提供了高效可靠的FRET图像分析,而钾指标提供了有价值的见解内体运输系统中的钾动力学。
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来源期刊
Sensors and Actuators B: Chemical
Sensors and Actuators B: Chemical 工程技术-电化学
CiteScore
14.60
自引率
11.90%
发文量
1776
审稿时长
3.2 months
期刊介绍: Sensors & Actuators, B: Chemical is an international journal focused on the research and development of chemical transducers. It covers chemical sensors and biosensors, chemical actuators, and analytical microsystems. The journal is interdisciplinary, aiming to publish original works showcasing substantial advancements beyond the current state of the art in these fields, with practical applicability to solving meaningful analytical problems. Review articles are accepted by invitation from an Editor of the journal.
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