Multistep Metabolic Engineering of Escherichia coli for High-Level Ectoine Production.

IF 3.9 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS ACS Synthetic Biology Pub Date : 2025-04-18 Epub Date: 2025-03-25 DOI:10.1021/acssynbio.4c00876
Zheng Lei, Jinyong Wu, Caiwen Lao, Jin Wang, Yanyi Xu, He Li, Lixia Yuan, Xiangsong Chen, Jianming Yao
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Abstract

Ectoine is an important natural macromolecule protector that helps extremophiles maintain cellular stability and function under high-salinity conditions. Recently, the development of microbial strains for high-level ectoine production has become an attractive research direction. In this study, we constructed an efficient plasmid-free ectoine-producing strain. We modified the 5'-untranslated region of the ectABC gene cluster from Halomonas elongate to fine-tune the expression of genes ectA, ectB, and ectC. Furthermore, we optimized the carbon flow across the MEP pathway, the TCA cycle, and the aspartic acid metabolic pathway. Subsequently, we blocked the production of byproducts from the aspartic acid metabolic pathway and dynamically regulated the TCA cycle to coordinate the balance between strain growth and production. The final strain was tested in a 5-L fermenter, which reached 118.5 g/L at 114 h of fermentation. The metabolic engineering strategies employed in this study can be used for the biosynthesis of other aspartate derivatives.

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大肠杆菌多步骤代谢工程高产艾克托因。
异托碱是一种重要的天然高分子保护剂,帮助极端微生物在高盐度条件下维持细胞的稳定性和功能。近年来,开发用于生产高水平异托碱的微生物菌株已成为一个有吸引力的研究方向。在本研究中,我们构建了一株高效的无质粒产异托因菌株。我们修改了长形盐单胞菌的ectABC基因簇的5'-未翻译区域,以微调基因ectA, ectB和ectC的表达。此外,我们还对MEP途径、TCA循环和天冬氨酸代谢途径的碳流进行了优化。随后,我们阻断天冬氨酸代谢途径副产物的产生,并动态调节TCA循环,以协调菌株生长和生产之间的平衡。最终菌株在5-L发酵罐中进行测试,在发酵114 h时达到118.5 g/L。本研究采用的代谢工程策略可用于其他天冬氨酸衍生物的生物合成。
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阿拉丁
spectinomycin
阿拉丁
kanamycin
阿拉丁
ectoine standard ampicillin
来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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