Biochemical Characterization of a GH11 Xylanase from Xylanase-Producing Trichoderma citrinoviride

IF 3.3 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Applied Biochemistry and Biotechnology Pub Date : 2025-03-24 DOI:10.1007/s12010-025-05213-4
Beom Soo Kim, Bo Min Jeong, Dongeon Kim, Soo Rin Kim, In Jung Kim
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Abstract

Xylan, a prevalent component of lignocellulose, ranks as the second most abundant carbohydrate in nature. Endo-1,4-xylanase, pivotal for its ability to cleave β-1,4-glycosidic linkages within xylan, is crucial for various applications in the food/feed processing, biofuel production, and paper/pulp industries. Although Trichoderma citrinoviride is renowned for its robust xylan-degrading capacity, the biochemical properties of xylanases derived from T. citrinoviride remain largely uncharacterized. Therefore, this study was conducted to explore the biochemical characteristics of a glycoside hydrolase family 11 xylanase derived from T. citrinoviride (TciGH11). This newly identified enzyme efficiently hydrolyzed beechwood xylan into xylooligosaccharides, exhibiting optimal activity at pH 4.5 and 50 °C, with a specific activity of 1801.5 U mg−1 against beechwood xylan. Kinetic analysis revealed a Michaelis constant (Km), turnover number (kcat), and catalytic efficiency (kcat/Km) of 3.82 mg ml−1, 977.8 s−1, and 256.0 ml mg−1 s−1, respectively. Structural modeling analysis demonstrated that the non-conserved residues in TciGH11, specifically Glu162 and Ser165, affected the substrate binding properties, potentially resulting in different enzymatic activity compared to that of other xylanases from the Tricoderma genus. Overall, these results could be instrumental in advancing the utilization of lignocellulosic biomass, thereby supporting sustainable bioprocessing of lignocellulosic biomass.

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产木聚糖酶的黄绿木霉GH11木聚糖酶的生化特性
木聚糖是木质纤维素的主要成分,是自然界中含量第二丰富的碳水化合物。endo -1,4-木聚糖酶具有切割木聚糖内β-1,4-糖苷键的能力,在食品/饲料加工、生物燃料生产和造纸/纸浆工业的各种应用中至关重要。尽管黄绿木霉以其强大的木聚糖降解能力而闻名,但黄绿木霉衍生的木聚糖酶的生化特性在很大程度上仍未被表征。因此,本研究对从T. citriinoviride中提取的糖苷水解酶家族11木聚糖酶(TciGH11)的生化特性进行了研究。该酶对山毛榉木聚糖的比活性为1801.5 U mg-1,在pH 4.5和50℃条件下具有最佳的水解活性。动力学分析表明,该化合物的米切里斯常数(Km)、周转数(kcat)和催化效率(kcat/Km)分别为3.82 mg ml-1、977.8 s-1和256.0 ml mg-1 s-1。结构建模分析表明,TciGH11中的非保守残基,特别是Glu162和Ser165,影响了底物结合特性,可能导致其酶活性与其他木霉属木聚糖酶不同。总的来说,这些结果可能有助于推进木质纤维素生物质的利用,从而支持木质纤维素生物质的可持续生物加工。
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来源期刊
Applied Biochemistry and Biotechnology
Applied Biochemistry and Biotechnology 工程技术-生化与分子生物学
CiteScore
5.70
自引率
6.70%
发文量
460
审稿时长
5.3 months
期刊介绍: This journal is devoted to publishing the highest quality innovative papers in the fields of biochemistry and biotechnology. The typical focus of the journal is to report applications of novel scientific and technological breakthroughs, as well as technological subjects that are still in the proof-of-concept stage. Applied Biochemistry and Biotechnology provides a forum for case studies and practical concepts of biotechnology, utilization, including controls, statistical data analysis, problem descriptions unique to a particular application, and bioprocess economic analyses. The journal publishes reviews deemed of interest to readers, as well as book reviews, meeting and symposia notices, and news items relating to biotechnology in both the industrial and academic communities. In addition, Applied Biochemistry and Biotechnology often publishes lists of patents and publications of special interest to readers.
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