Preliminary In silico Analysis of Echinococcus granulosus Calreticulin for Enhanced Vaccine Design against Cystic Echinococcosis.

Zahra Gorgin, Mahzad Yousefi, Shadan Ghiabi, Ali Elahinia, Hamed Yousefi, Zahra Fadaeian Aghmyouni, Negar Jahani, Amirhossein Asgari, Erfan Hamedi, Romina Rajabi, Parham Rahmanian, Saeed Hashemi, Mohammad Arad Zandieh, Hamidreza Majidiani, Alireza Motahari
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Abstract

Background: A neglected zoonosis, Cystic Echinococcosis (CE), is most common in developing nations worldwide. Vaccination is, therefore, helpful in preventing this disease.

Objective: Predicting the main biochemical properties of E. granulosus Calreticulin (CRT) and its possible B-cell and T-cell-binding epitopes as a valuable candidate for immunization was the goal of the current study.

Methods: Predictions were made to determine biochemical, antigenic, structural, and subcellular characteristics, along with the immunogenic epitopes, using several online servers.

Results: The extracellular 48.15 KDa protein exhibited no allergenicity, while possessing hydrophilicity (GRAVY: -0.785), stability (instability: 33.88), tolerance to a wide range of temperatures (aliphatic: 62.45), and 59 post-translational modification sites. The secondary structure mostly comprised random coils and extended strands. The 3D model was generated using the Robetta server (confidence: 0.72), and was rehashed and confirmed subsequently. Common B-cell epitopes were discovered by three servers and screened for antigenic, allergenic, and solubility traits. Moreover, MHC-associated epitopes for mice and humans were predicted in E. granulosus CRT with subsequent screening.

Conclusion: This work offers a foundation for further investigation in order to design an effective vaccination against CE. Further empirical research on the examined protein solely or in combination with other antigens is needed.

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囊性棘球蚴病强化疫苗设计中细粒棘球蚴钙网蛋白的初步计算机分析。
背景:囊性棘球蚴病是一种被忽视的人畜共患病,在世界范围内的发展中国家最为常见。因此,接种疫苗有助于预防这种疾病。目的:预测细粒钙网蛋白(CRT)的主要生化特性及其可能的b细胞和t细胞结合表位,作为有价值的免疫候选物是本研究的目的。方法:使用几个在线服务器进行预测,以确定生化,抗原,结构和亚细胞特征,以及免疫原性表位。结果:细胞外48.15 KDa蛋白具有亲水性(肉汁:-0.785)、稳定性(不稳定性:33.88)、广泛温度耐受性(脂肪族:62.45)和59个翻译后修饰位点,无致敏性。二级结构主要由随机线圈和延伸的股线组成。使用Robetta服务器生成三维模型(置信度:0.72),随后重新哈希并确认。三个服务器发现了常见的b细胞表位,并进行了抗原、致敏性和溶解度的筛选。此外,在随后的筛选中,预测了小鼠和人类的mhc相关表位。结论:本工作为进一步研究设计有效的CE疫苗提供了基础。需要对所检测的蛋白单独或与其他抗原结合进行进一步的实证研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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CiteScore
4.30
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发文量
33
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