Tailored 3D microphantoms: An essential tool for quantitative phase tomography analysis of organoids

IF 6.6 2区 医学 Q1 ENGINEERING, BIOMEDICAL Biocybernetics and Biomedical Engineering Pub Date : 2025-04-01 Epub Date: 2025-04-15 DOI:10.1016/j.bbe.2025.03.003
Michał Ziemczonok , Sylvia Desissaire , Jérémy Neri , Arkadiusz Kuś , Lionel Hervé , Cécile Fiche , Guillaume Godefroy , Marie Fackeure , Damien Sery , Wojciech Krauze , Kiran Padmanabhan , Chiara Paviolo , Małgorzata Kujawińska
{"title":"Tailored 3D microphantoms: An essential tool for quantitative phase tomography analysis of organoids","authors":"Michał Ziemczonok ,&nbsp;Sylvia Desissaire ,&nbsp;Jérémy Neri ,&nbsp;Arkadiusz Kuś ,&nbsp;Lionel Hervé ,&nbsp;Cécile Fiche ,&nbsp;Guillaume Godefroy ,&nbsp;Marie Fackeure ,&nbsp;Damien Sery ,&nbsp;Wojciech Krauze ,&nbsp;Kiran Padmanabhan ,&nbsp;Chiara Paviolo ,&nbsp;Małgorzata Kujawińska","doi":"10.1016/j.bbe.2025.03.003","DOIUrl":null,"url":null,"abstract":"<div><div>We present a novel approach for benchmarking and validating quantitative phase tomography (QPT) systems using three-dimensional microphantoms. These microphantoms, crafted from biological and imaging data, replicate the optical and structural properties of multicellular biological samples. Their fabrication featuring refractive index modulation at sub-micrometer details is enabled by two-photon polymerization. We showcase the effectiveness of our technique via a round-robin test of healthy and tumoral liver organoid phantoms across three different QPT systems. This test reveals sample- and system-dependent errors in measuring dry mass and morphology. This approach constitutes a development of super phantoms for QPT — test objects that exist in both digital and physical form, replicate both the morphology and relevant aspects of physiology in specimens under healthy or diseased conditions, and underpin the assessment and refinement of imaging technologies and methodologies prior to clinical application.</div></div>","PeriodicalId":55381,"journal":{"name":"Biocybernetics and Biomedical Engineering","volume":"45 2","pages":"Pages 247-257"},"PeriodicalIF":6.6000,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biocybernetics and Biomedical Engineering","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0208521625000221","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/4/15 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0

Abstract

We present a novel approach for benchmarking and validating quantitative phase tomography (QPT) systems using three-dimensional microphantoms. These microphantoms, crafted from biological and imaging data, replicate the optical and structural properties of multicellular biological samples. Their fabrication featuring refractive index modulation at sub-micrometer details is enabled by two-photon polymerization. We showcase the effectiveness of our technique via a round-robin test of healthy and tumoral liver organoid phantoms across three different QPT systems. This test reveals sample- and system-dependent errors in measuring dry mass and morphology. This approach constitutes a development of super phantoms for QPT — test objects that exist in both digital and physical form, replicate both the morphology and relevant aspects of physiology in specimens under healthy or diseased conditions, and underpin the assessment and refinement of imaging technologies and methodologies prior to clinical application.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
量身定制的3D显微模型:类器官定量相位断层扫描分析的重要工具
我们提出了一种新的方法,用于基准测试和验证定量相断层扫描(QPT)系统使用三维显微成像。这些微型模型是根据生物和成像数据制作的,复制了多细胞生物样本的光学和结构特性。它们的制造具有亚微米级的折射率调制,是通过双光子聚合实现的。我们通过在三种不同的QPT系统中对健康和肿瘤肝类器官幻影进行循环测试,展示了我们技术的有效性。该测试揭示了在测量干质量和形貌时样品和系统相关的误差。这种方法构成了QPT超级幻影的发展-以数字和物理形式存在的测试对象,在健康或患病条件下复制标本的形态学和生理学相关方面,并在临床应用之前支持成像技术和方法的评估和改进。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
16.50
自引率
6.20%
发文量
77
审稿时长
38 days
期刊介绍: Biocybernetics and Biomedical Engineering is a quarterly journal, founded in 1981, devoted to publishing the results of original, innovative and creative research investigations in the field of Biocybernetics and biomedical engineering, which bridges mathematical, physical, chemical and engineering methods and technology to analyse physiological processes in living organisms as well as to develop methods, devices and systems used in biology and medicine, mainly in medical diagnosis, monitoring systems and therapy. The Journal''s mission is to advance scientific discovery into new or improved standards of care, and promotion a wide-ranging exchange between science and its application to humans.
期刊最新文献
Differentiation of peripheral nerve fiber activation through electrodermal activity in healthy adults Modeling progressive damage accumulation in cortical bone from human ribs using acoustic emission data Energy-efficient detection of rheumatoid arthritis using spiking neural networks and thermographic imaging Supervised machine learning methods for short-term prediction of a sudden cardiac death from electrocardiogram Computational aberration correction enables full-thickness retinal imaging with adaptive optics optical coherence tomography
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1