Phylogenetic relationships of three amino-acid-utilizing anaerobes, Selenomonas acidaminovorans, 'Selenomonas acidaminophila' and Eubacterium acidaminophilum, as inferred from partial 16S rDNA nucleotide sequences and proposal of Thermanaerovibrio acidaminovorans gen. nov., comb. nov. and Anaeromusa acidaminophila gen. nov., comb. nov.

S Baena, M L Fardeau, T H Woo, B Ollivier, M Labat, B K Patel
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引用次数: 63

Abstract

16S rRNA gene sequences of three previously described amino-acid-fermenting anaerobes, Selenomonas acidaminovorans, 'Selenomonas acidaminophila' and Eubacterium acidaminophilum, were determined. All three were found to cluster within the Clostridium and related genera of the subphylum of the Gram-positive bacteria. The thermophile, S. acidaminovorans, formed an individual line of descent and was equidistantly placed between Dethiosulfovibrio peptidovorans and Anaerobaculum thermoterrenum (similarity of 85%), both of which also form single lines of descent. 'S. acidaminophila' was related to Clostridium quercicolum, a member of cluster IX, with a similarity of 90%, whereas E. acidaminophilum was closely related to Clostridium litorale (similarity of 96%) as a member of cluster XI. Based on the phylogenetic data presented in this report and the phenotypic descriptions of these bacteria published previously, it is recommended that S. acidaminovorans be transferred to a new genus, Thermanaerovibrio gen. nov., as Thermanaerovibrio acidaminovorans comb. nov. and 'Selenomonas acidaminophila' be transferred to a new genus, Anaeromusa gen. nov., as Anaeromusa acidaminophila comb. nov. Though the transfer of E. acidaminophilum to a new taxon is justified, this is not recommended until the taxonomic status of all the members of cluster XI has been reviewed.

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从部分16S rDNA核苷酸序列推断出三种氨基酸利用厌氧菌——酸氨基单胞菌、嗜酸氨基单胞菌和嗜酸氨基真杆菌的系统发育关系,并提出了嗜酸氨基热弧菌。11月和嗜酸厌氧藻11月,梳。11月。
测定了三种氨基酸发酵厌氧菌——嗜酸单胞菌(Selenomonas acid aminoorans)、嗜酸单胞菌(Selenomonas acidaminophila)和嗜酸真杆菌(Eubacterium acidaminophilum)的16S rRNA基因序列。这三种细菌都属于革兰氏阳性菌亚门梭状芽孢杆菌及其相关属。嗜热菌S. acidaminovorans形成了一个单独的谱系,位于Dethiosulfovibrio peptidovorans和Anaerobaculum thermoterrenum之间(相似性为85%),两者也形成了单一的谱系。‘S. acidaminophila’与隶属于第九簇的quercicolum亲缘关系为90%,而隶属于第十一簇的E. acidaminophilum与隶属于第十一簇的Clostridium litorale亲缘关系为96%。根据本报告的系统发育数据和先前发表的这些细菌的表型描述,建议将S. acidaminovorans转移到一个新的属,Thermanaerovibrio gen. nov.,作为Thermanaerovibrio acidaminovorans comb。11 .和'嗜酸单胞菌'被转移到一个新的属,厌氧单胞菌gen. nov.,厌氧单胞菌嗜酸单胞菌梳子。11 .尽管将嗜酸乳杆菌转移到一个新的分类单元是合理的,但在对第11类所有成员的分类状况进行审查之前,不建议这样做。
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