The phylogenetic position of Serratia, Buttiauxella and some other genera of the family Enterobacteriaceae.

C Spröer, U Mendrock, J Swiderski, E Lang, E Stackebrandt
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引用次数: 139

Abstract

The phylogenetic relationships of the type strains of 38 species from 15 genera of the family Enterobacteriaceae were investigated by comparative 16S rDNA analysis. Several sequences of strains from the genera Citrobacter, Erwinia, Pantoea, Proteus, Rahnella and Serratia, analysed in this study, have been analysed previously. However, as the sequences of this study differ slightly from the published ones, they were included in the analysis. Of the 23 enterobacterial genera included in an overview dendrogram of relatedness, members of the genera Xenorhabdus, Photorhabdus, Proteus and Plesiomonas were used as a root. The other genera formed two groups which could be separated, although not exclusively, by signature nucleotides at positions 590-649 and 600-638. Group A contains species of Brenneria, Buttiauxella, Citrobacter, Escherichia, Erwinia, Klebsiella, Pantoea, Pectobacterium and Salmonella. All seven type strains of Buttiauxella share 16S rDNA similarities greater than 99%. Group B embraces two phylogenetically separate Serratia clusters, a lineage containing Yersinia species, Rahnella aquatica, Ewingella americana, and also the highly related pair Hafnia alvei and Obesumbacterium proteus.

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肠杆菌科沙雷氏菌、布氏菌及其他属的系统发育地位。
采用比较16S rDNA分析方法,对肠杆菌科15属38种类型菌株的系统发育关系进行了研究。本研究分析的Citrobacter属、Erwinia属、Pantoea属、Proteus属、Rahnella属和Serratia属菌株的几个序列之前已经分析过。然而,由于本研究的序列与已发表的略有不同,因此将其纳入分析。在概述亲缘关系的23个肠杆菌属中,Xenorhabdus、Photorhabdus、Proteus和Plesiomonas属的成员被作为根。其他属形成两个类群,可以通过在590-649和600-638位置的特征核苷酸来区分,尽管不是完全分开。A组包括Brenneria、Buttiauxella、Citrobacter、Escherichia、Erwinia、Klebsiella、Pantoea、Pectobacterium和沙门氏菌。7株布氏菌的16S rDNA相似性均大于99%。B组包括两个系统发育上独立的沙雷菌群,一个谱系包含耶尔森氏菌种,水生拉赫氏菌,美洲埃温氏菌,以及高度相关的一对Hafnia alvei和Obesumbacterium proteus。
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