Pseudomonas libanensis sp. nov., a new species isolated from Lebanese spring waters.

F Dabboussi, M Hamze, M Elomari, S Verhille, N Baida, D Izard, H Leclerc
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引用次数: 48

Abstract

The taxonomic position of eight fluorescent Pseudomonas isolates, from two Lebanese spring waters, which were previously recognized by numerical analysis as members of a new subcluster (subcluster Vb) was examined. Except for one strain, the new subcluster exhibited internal DNA hybridization values of 76-100%, and 9-53% hybridization was measured with the type or reference strains of other Pseudomonas species. The highest DNA binding value was found with Pseudomonas marginalis strains (37-53%). The G+C content of the DNA of the type strain was 58 mol%. A comparison of 1322 nt of the 16S rRNA gene sequence of the strain representing subcluster Vb (CFML 96-195T) with the sequence of other strains of the genus Pseudomonas revealed that strain CFML 96-195T was part of the 'Pseudomonas fluorescens intrageneric cluster'. On the basis of the results of phenotypic, DNA-DNA and phylogenetic analyses, a new Pseudomonas species, Pseudomonas libanensis sp. nov., is proposed for the seven strains of subcluster Vb. The type strain is P. libanensis CFML 96-195T and has been deposited in the Collection de l'Institut Pasteur (Paris, France) as CIP 105460T. The P. libanensis strains are phenotypically and genotypically homogeneous and can be differentiated from most other fluorescent species by several phenotypic features. Differentiation of P. libanensis and Pseudomonas aeruginosa is based mainly on pyocyanin production; P. libanensis can be differentiated from P. fluorescens (all biovars) by alpha-aminobutyrate assimilation. The clinical significance of P. libanensis is unknown.

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黎巴嫩泉水假单胞菌一新种。
从两个黎巴嫩泉水中分离的8株荧光假单胞菌的分类位置进行了研究,这些菌株以前通过数值分析被识别为一个新的亚簇(亚簇Vb)的成员。除1株假单胞菌外,该亚簇内部DNA杂交值为76 ~ 100%,与其他假单胞菌类型或参考菌株的杂交率为9 ~ 53%。边缘假单胞菌的DNA结合值最高(37-53%)。菌株DNA中G+C含量为58 mol%。对代表Vb亚簇(CFML 96-195T)的菌株的16S rRNA基因序列1322 nt与假单胞菌属其他菌株的序列进行比较,结果表明CFML 96-195T属于“荧光假单胞菌属内簇”。根据表型、DNA-DNA和系统发育分析结果,提出了7株Vb亚群假单胞菌的新种——利班假单胞菌sp. nov.。型菌株为P. libanensis CFML 96-195T,已存于法国巴黎巴斯德研究所(Collection de l’institut Pasteur, Paris, France),编号为CIP 105460T。P. libanensis菌株在表型和基因表型上是均匀的,并且可以通过几个表型特征与大多数其他荧光物种区分开来。黎班假单胞菌与铜绿假单胞菌的分化主要基于产花青素;P. libanensis可以通过α -氨基丁酸同化与P. fluorescens(所有生物变种)区分。P. libanensis的临床意义尚不清楚。
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