Comparative Analysis of the Glutathione S-Transferase Gene Family of Four Triticeae Species and Transcriptome Analysis of GST Genes in Common Wheat Responding to Salt Stress.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY International Journal of Genomics Pub Date : 2021-02-18 eCollection Date: 2021-01-01 DOI:10.1155/2021/6289174
Yongchao Hao, Shoushen Xu, Zhongfan Lyu, Hongwei Wang, Lingrang Kong, Silong Sun
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引用次数: 25

Abstract

Glutathione S-transferases (GSTs) are ancient proteins encoded by a large gene family in plants, which play multiple roles in plant growth and development. However, there has been little study on the GST genes of common wheat (Triticum aestivum) and its relatives (Triticum durum, Triticum urartu, and Aegilops tauschii), which are four important species of Triticeae. Here, a genome-wide comprehensive analysis of this gene family was performed on the genomes of common wheat and its relatives. A total of 346 GST genes in T. aestivum, 226 in T. durum, 104 in T. urartu, and 105 in Ae. tauschii were identified, and all members were divided into ten classes. Transcriptome analysis was used to identify GST genes that respond to salt stress in common wheat, which revealed that the reaction of GST genes is not sensitive to low and moderate salt concentrations but is sensitive to severe concentrations of the stressor, and the GST genes related to salt stress mainly come from the Tau and Phi classes. Six GST genes which respond to different salt concentrations were selected and validated by a qRT-PCR assay. These findings will not only provide helpful information about the function of GST genes in Triticeae species but also offer insights for the future application of salt stress resistance breeding in common wheat.

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4种小麦谷胱甘肽s -转移酶基因家族的比较分析及普通小麦对盐胁迫的GST基因转录组分析。
谷胱甘肽s -转移酶(GSTs)是植物中一个庞大的基因家族编码的古老蛋白,在植物生长发育过程中发挥着多种作用。然而,小麦(Triticum aestivum)及其近缘种(Triticum durum、Triticum urartu和Aegilops tauschii)的GST基因研究较少。本文对普通小麦及其近缘种的基因组进行了该基因家族的全基因组综合分析。共有346个GST基因在aestivum, 226个在durum, 104个在urartu, 105个在Ae。鉴定出陶什族,并将所有成员分为十个纲。通过转录组分析,鉴定了普通小麦响应盐胁迫的GST基因,结果表明GST基因对低、中盐胁迫反应不敏感,但对高盐胁迫反应敏感,与盐胁迫相关的GST基因主要来自Tau类和Phi类。选择了6个响应不同盐浓度的GST基因,并通过qRT-PCR试验进行了验证。这些发现不仅为小麦属植物GST基因的功能研究提供了有益的信息,也为今后在普通小麦抗盐胁迫育种中的应用提供了启示。
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来源期刊
International Journal of Genomics
International Journal of Genomics BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
5.40
自引率
0.00%
发文量
33
审稿时长
17 weeks
期刊介绍: International Journal of Genomics is a peer-reviewed, Open Access journal that publishes research articles as well as review articles in all areas of genome-scale analysis. Topics covered by the journal include, but are not limited to: bioinformatics, clinical genomics, disease genomics, epigenomics, evolutionary genomics, functional genomics, genome engineering, and synthetic genomics.
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