OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources.

IF 1.5 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Journal of Integrative Bioinformatics Pub Date : 2021-03-19 DOI:10.1515/jib-2020-0046
Md Asif Ahsan, Yongjing Liu, Cong Feng, Ralf Hofestädt, Ming Chen
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引用次数: 9

Abstract

Outbreaks of COVID-19 caused by the novel coronavirus SARS-CoV-2 is still a threat to global human health. In order to understand the biology of SARS-CoV-2 and developing drug against COVID-19, a vast amount of genomic, proteomic, interatomic, and clinical data is being generated, and the bioinformatics researchers produced databases, webservers and tools to gather those publicly available data and provide an opportunity of analyzing such data. However, these bioinformatics resources are scattered and researchers need to find them from different resources discretely. To facilitate researchers in finding the resources in one frame, we have developed an integrated web portal called OverCOVID (http://bis.zju.edu.cn/overcovid/). The publicly available webservers, databases and tools associated with SARS-CoV-2 have been incorporated in the resource page. In addition, a network view of the resources is provided to display the scope of the research. Other information like SARS-CoV-2 strains is visualized and various layers of interaction resources is listed in distinct pages of the web portal. As an integrative web portal, the OverCOVID will help the scientist to search the resources and accelerate the clinical research of SARS-CoV-2.

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OverCOVID: SARS-CoV-2生物信息学资源综合门户网站。
由新型冠状病毒SARS-CoV-2引起的2019冠状病毒病(COVID-19)疫情仍对全球人类健康构成威胁。为了了解SARS-CoV-2的生物学特性并开发针对COVID-19的药物,大量的基因组学、蛋白质组学、原子间学和临床数据正在产生,生物信息学研究人员开发了数据库、网络服务器和工具来收集这些公开可用的数据,并提供分析这些数据的机会。然而,这些生物信息学资源是分散的,研究人员需要从不同的资源中离散地找到它们。为了方便研究人员在一个框架内查找资源,我们开发了一个名为OverCOVID的综合门户网站(http://bis.zju.edu.cn/overcovid/)。与SARS-CoV-2相关的公开网络服务器、数据库和工具已纳入资源页面。此外,还提供了资源的网络视图,以显示研究的范围。其他信息,如SARS-CoV-2菌株,是可视化的,各种层次的互动资源在门户网站的不同页面上列出。作为一个综合性门户网站,OverCOVID将帮助科学家搜索资源,加快SARS-CoV-2的临床研究。
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来源期刊
Journal of Integrative Bioinformatics
Journal of Integrative Bioinformatics Medicine-Medicine (all)
CiteScore
3.10
自引率
5.30%
发文量
27
审稿时长
12 weeks
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