Bilayer thickness and membrane protein function: an energetic perspective.

Olaf S Andersen, Roger E Koeppe
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引用次数: 754

Abstract

The lipid bilayer component of biological membranes is important for the distribution, organization, and function of bilayer-spanning proteins. This regulation is due to both specific lipid-protein interactions and general bilayer-protein interactions, which modulate the energetics and kinetics of protein conformational transitions, as well as the protein distribution between different membrane compartments. The bilayer regulation of membrane protein function arises from the hydrophobic coupling between the protein's hydrophobic domains and the bilayer hydrophobic core, which causes protein conformational changes that involve the protein/bilayer boundary to perturb the adjacent bilayer. Such bilayer perturbations, or deformations, incur an energetic cost, which for a given conformational change varies as a function of the bilayer material properties (bilayer thickness, intrinsic lipid curvature, and the elastic compression and bending moduli). Protein function therefore is regulated by changes in bilayer material properties, which determine the free-energy changes caused by the protein-induced bilayer deformation. The lipid bilayer thus becomes an allosteric regulator of membrane function.

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双层厚度与膜蛋白功能:能量视角。
生物膜的脂质双层组分对双层跨越蛋白的分布、组织和功能至关重要。这种调节是由于特定的脂质-蛋白质相互作用和一般的双层-蛋白质相互作用,它们调节蛋白质构象转变的能量学和动力学,以及不同膜室之间的蛋白质分布。膜蛋白功能的双层调控源于蛋白质的疏水结构域与双层疏水核心之间的疏水偶联,导致涉及蛋白质/双层边界的蛋白质构象改变,从而干扰相邻的双层。这种双层扰动或变形会产生能量损失,对于给定的构象变化,能量损失随双层材料性质(双层厚度、固有脂质曲率以及弹性压缩和弯曲模量)的变化而变化。因此,蛋白质的功能是由双层材料性质的变化来调节的,这决定了由蛋白质诱导的双层变形引起的自由能变化。脂质双分子层因此成为膜功能的变构调节剂。
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Visualizing flexibility at molecular resolution: analysis of heterogeneity in single-particle electron microscopy reconstructions. Phase boundaries and biological membranes. Calculation of protein-ligand binding affinities. Synthetic gene circuits: design with directed evolution. Bilayer thickness and membrane protein function: an energetic perspective.
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