EI of the Phosphotransferase System of Escherichia coli: Mathematical Modeling Approach to Analysis of Its Kinetic Properties.

T A Karelina, H Ma, I Goryanin, O V Demin
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引用次数: 15

Abstract

The mathematical model of the operation of the first enzyme of the Escherichia coli phosphotransferase system, EI, is proposed. Parameters of the kinetic model describing the operation of EI under different conditions are identified on the basis of a large amount of known experimental data. The verified model is employed to predict modes of operation of EI under both in vivo physiological conditions and in vitro nonphysiological conditions. The model predicts that under in vivo physiological conditions, the rate of phosphotransfer from EI to the second protein of the phosphotransferase system HPr by the dimer is much higher than by the monomer. A hypothesis is proposed on the basis of calculations that the transfer by a monomer plays a role in the regulation of chemotaxis. At submicromolar pyruvate concentration, the model predicts nonmonotonic dependence of the phosphotransfer rate on the substrate (PEP) concentration.

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大肠杆菌磷酸转移酶体系的EI:动力学性质分析的数学建模方法。
提出了大肠杆菌磷酸转移酶系统第一酶EI的数学模型。在大量已知实验数据的基础上,确定了描述EI在不同条件下运行的动力学模型参数。验证后的模型用于预测EI在体内生理条件和体外非生理条件下的运作模式。该模型预测,在体内生理条件下,二聚体将EI中的磷转移到磷酸转移酶系统HPr的第二蛋白上的速率远高于单体。在计算的基础上提出了一个假设,即单体的转移在趋化性调节中起作用。在亚微摩尔丙酮酸浓度下,该模型预测了磷酸化转移速率对底物(PEP)浓度的非单调依赖性。
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