Complete mitochondrial genome of the grass moth Glyphodes quadrimaculalis (Lepidoptera: Crambidae).

Mitochondrial Dna Pub Date : 2015-04-01 Epub Date: 2013-09-11 DOI:10.3109/19401736.2013.823183
Jeong Sun Park, Min Jee Kim, Seung-Joon Ahn, Iksoo Kim
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引用次数: 16

Abstract

Glyphodes quadrimaculalis (Lepidoptera: Crambidae) feed on a root tuber of Cynanchum wilfordii (Asclepiadaceae), which is one of the most famous traditional medicines in Korea. The genus Glyphodes includes ∼ 130 species distributed worldwide, so the complete mitochondrial genome (mitogenome) would be helpful for bio-identification, biogeographic studies and multigene-based phylogeny. The 15,255 bp long G. quadrimaculalis genome comprises 37 typical genes and 1 large non-coding region, with the typical arrangement found in Lepidoptera. Of the 13 protein coding genes (PCGs), 12 begin with typical start codons found in insect mitochondrial PCGs, but the COI gene starts with atypical CGA. One of the noteworthy features of the genome includes the presence of a 51-bp long non-coding space sequence located between tRNA(Gln) and ND2 that reveals high-sequence homology (71.4%) to the neighboring ND2 gene, indicating the origin of the region by partial duplication of the ND2 gene.

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鳞翅目:草蛾科草蛾线粒体全基因组的研究。
在韩国,最著名的传统药材之一——金缕草(金缕草科)的块根正在被四棱草蛾(鳞翅目:金缕草科)吃掉。Glyphodes属包括分布在世界各地的约130种,因此完整的线粒体基因组(mitogenome)将有助于生物鉴定、生物地理研究和基于多基因的系统发育。长15255bp的长角斑蝶基因组包含37个典型基因和1个大的非编码区,其排列方式在鳞翅目中较为典型。在13个蛋白质编码基因(PCGs)中,12个以昆虫线粒体PCGs中发现的典型起始密码子开始,但COI基因以非典型CGA开始。该基因组的一个值得注意的特征是,在tRNA(Gln)和ND2之间存在一个51 bp长的非编码空间序列,该序列与邻近的ND2基因具有高度同源性(71.4%),表明该区域的起源是ND2基因的部分重复。
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Mitochondrial Dna
Mitochondrial Dna 生物-遗传学
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2.4 months
期刊介绍: Previously published under the title DNA Sequence (Vols 1-19.3), Mitochondrial DNA accepts original high-quality reports based on mapping, sequencing and analysis of mitochondrial DNA and RNA. Descriptive papers on DNA sequences from mitochondrial genomes, and also analytical papers in the areas of population genetics, medical genetics, phylogenetics and human evolution that use mitochondrial DNA as a source of evidence for studies will be considered for publication. The editorial board will also consider manuscripts that examine population genetic and systematic theory that specifically address the use of mitochondrial DNA sequences.
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