Genetic variation among four bred populations of two tilapia strains, based on mitochondrial D-loop sequences.

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2014-01-07 DOI:10.3109/19401736.2013.855735
Zhiying Zou, Dayu Li, Jinglin Zhu, Jue Han, Wei Xiao, Hong Yang
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引用次数: 3

Abstract

The hybrid between Nile tilapia (Oreochromis niloticus,♀) and blue tilapia (O. aureus,♂) is an important strain in Chinese aquaculture industry. Two populations named AF (O. aureus, 29 samples) and NF (O. niloticus, 22 samples) were gathered from Freshwater Fisheries Research Center (FFRC). The other two named AG (O. aureus, 29 samples) and NG (O. niloticus, 28 samples) from Guangxi Fisheries Research Institute (GFRI). GFRI introduced AG and NG from AF and NF. The mitochondrial DNA D-loop was sequenced to assess the genetic diversity among four populations. A 580 bp fragment was sequenced. The 93 variable sites defined 39 haplotypes and three were shared. As a result, the genetic diversity of O. aureus AF and AG was much lower (H=0.497-0.532, K=0.69-0.714, π=0.0012-0.00124) than that of O. niloticus (H=0.849-0.866, K=24.286-24.807, π=0.04246-0.04337). Furthermore, the indices (H, K, π and D) was a slight increase between AF and AG, so did NF and NG. These results indicated that as the male parent, the AF and AG population was purebred and sustainable. And as the female parent, NF and NG had high genetic diversity. The conclusions might give reference to keep the germplasm diversity of tilapia and other introduced fishes.

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基于线粒体d -环序列的两个罗非鱼品系四个繁殖群体的遗传变异。
尼罗罗非鱼(Oreochromis niloticus,♀)与蓝罗非鱼(O. aureus,♂)的杂交品种是我国养殖业的重要品种。从淡水渔业研究中心采集到2个种群,分别命名为AF(金黄色葡萄球菌,29份)和NF(尼罗ticus, 22份)。另外2例分别为来自广西渔业研究所的AG(金黄色葡萄球菌,29份)和NG(尼罗ticus, 28份)。GFRI从AF和NF中引入AG和NG。对线粒体DNA d环进行测序,以评估4个群体的遗传多样性。测序得到一个580 bp的片段。93个可变位点定义了39个单倍型,其中3个是共享的。结果表明,金黄色葡萄球菌AF和AG的遗传多样性(H=0.497 ~ 0.532, K=0.69 ~ 0.714, π=0.0012 ~ 0.00124)明显低于niloticus的遗传多样性(H=0.849 ~ 0.866, K=24.286 ~ 24.807, π=0.04246 ~ 0.04337)。此外,AF和AG之间的指数(H、K、π和D)略有增加,NF和NG之间也略有增加。这些结果表明,作为父本,AF和AG群体是纯种和可持续的。作为母本,NF和NG具有较高的遗传多样性。结论可为保持罗非鱼及其他引进鱼类的种质多样性提供参考。
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来源期刊
Mitochondrial Dna
Mitochondrial Dna 生物-遗传学
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审稿时长
2.4 months
期刊介绍: Previously published under the title DNA Sequence (Vols 1-19.3), Mitochondrial DNA accepts original high-quality reports based on mapping, sequencing and analysis of mitochondrial DNA and RNA. Descriptive papers on DNA sequences from mitochondrial genomes, and also analytical papers in the areas of population genetics, medical genetics, phylogenetics and human evolution that use mitochondrial DNA as a source of evidence for studies will be considered for publication. The editorial board will also consider manuscripts that examine population genetic and systematic theory that specifically address the use of mitochondrial DNA sequences.
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