Angeliki Skoura, Predrag R Bakic, Vasilis Megalooikonomou
{"title":"Analyzing tree-shape anatomical structures using topological descriptors of branching and ensemble of classifiers.","authors":"Angeliki Skoura, Predrag R Bakic, Vasilis Megalooikonomou","doi":"","DOIUrl":null,"url":null,"abstract":"<p><p>The analysis of anatomical tree-shape structures visualized in medical images provides insight into the relationship between tree topology and pathology of the corresponding organs. In this paper, we propose three methods to extract descriptive features of the branching topology; the asymmetry index, the encoding of branching patterns using a node labeling scheme and an extension of the Sholl analysis. Based on these descriptors, we present classification schemes for tree topologies with respect to the underlying pathology. Moreover, we present a classifier ensemble approach which combines the predictions of the individual classifiers to optimize the classification accuracy. We applied the proposed methodology to a dataset of x-ray galactograms, medical images which visualize the breast ductal tree, in order to recognize images with radiological findings regarding breast cancer. The experimental results demonstrate the effectiveness of the proposed framework compared to state-of-the-art techniques suggesting that the proposed descriptors provide more valuable information regarding the topological patterns of ductal trees and indicating the potential of facilitating early breast cancer diagnosis.</p>","PeriodicalId":90632,"journal":{"name":"Journal of theoretical and applied computer science","volume":"7 1","pages":"3-19"},"PeriodicalIF":0.0000,"publicationDate":"2013-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4235674/pdf/nihms571003.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of theoretical and applied computer science","FirstCategoryId":"1085","ListUrlMain":"","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
The analysis of anatomical tree-shape structures visualized in medical images provides insight into the relationship between tree topology and pathology of the corresponding organs. In this paper, we propose three methods to extract descriptive features of the branching topology; the asymmetry index, the encoding of branching patterns using a node labeling scheme and an extension of the Sholl analysis. Based on these descriptors, we present classification schemes for tree topologies with respect to the underlying pathology. Moreover, we present a classifier ensemble approach which combines the predictions of the individual classifiers to optimize the classification accuracy. We applied the proposed methodology to a dataset of x-ray galactograms, medical images which visualize the breast ductal tree, in order to recognize images with radiological findings regarding breast cancer. The experimental results demonstrate the effectiveness of the proposed framework compared to state-of-the-art techniques suggesting that the proposed descriptors provide more valuable information regarding the topological patterns of ductal trees and indicating the potential of facilitating early breast cancer diagnosis.
通过对医学影像中可视化的解剖树形结构进行分析,可以深入了解树形拓扑结构与相应器官病理之间的关系。在本文中,我们提出了三种提取分支拓扑描述性特征的方法:不对称指数、使用节点标记方案对分支模式进行编码以及扩展 Sholl 分析。根据这些描述特征,我们提出了与潜在病理有关的树拓扑分类方案。此外,我们还提出了一种分类器集合方法,该方法结合了各个分类器的预测结果,以优化分类准确性。我们将所提出的方法应用于 X 射线半乳图数据集(可视化乳腺导管树的医学图像),以识别具有乳腺癌放射学发现的图像。实验结果表明,与最先进的技术相比,所提出的框架非常有效,表明所提出的描述符提供了有关乳腺导管树拓扑模式的更有价值的信息,并显示了促进早期乳腺癌诊断的潜力。