Automated Cell Detection and Morphometry on Growth Plate Images of Mouse Bone.

Maria-Grazia Ascenzi, Xia Du, James I Harding, Emily N Beylerian, Brian M de Silva, Ben J Gross, Hannah K Kastein, Weiguang Wang, Karen M Lyons, Hayden Schaeffer
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引用次数: 2

Abstract

Microscopy imaging of mouse growth plates is extensively used in biology to understand the effect of specific molecules on various stages of normal bone development and on bone disease. Until now, such image analysis has been conducted by manual detection. In fact, when existing automated detection techniques were applied, morphological variations across the growth plate and heterogeneity of image background color, including the faint presence of cells (chondrocytes) located deeper in tissue away from the image's plane of focus, and lack of cell-specific features, interfered with identification of cell. We propose the first method of automated detection and morphometry applicable to images of cells in the growth plate of long bone. Through ad hoc sequential application of the Retinex method, anisotropic diffusion and thresholding, our new cell detection algorithm (CDA) addresses these challenges on bright-field microscopy images of mouse growth plates. Five parameters, chosen by the user in respect of image characteristics, regulate our CDA. Our results demonstrate effectiveness of the proposed numerical method relative to manual methods. Our CDA confirms previously established results regarding chondrocytes' number, area, orientation, height and shape of normal growth plates. Our CDA also confirms differences previously found between the genetic mutated mouse Smad1/5CKO and its control mouse on fluorescence images. The CDA aims to aid biomedical research by increasing efficiency and consistency of data collection regarding arrangement and characteristics of chondrocytes. Our results suggest that automated extraction of data from microscopy imaging of growth plates can assist in unlocking information on normal and pathological development, key to the underlying biological mechanisms of bone growth.

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小鼠骨生长板图像的自动细胞检测和形态测定。
小鼠生长板的显微镜成像在生物学中被广泛用于了解特定分子对正常骨发育各个阶段和骨病的影响。到目前为止,这种图像分析一直是通过人工检测进行的。事实上,当应用现有的自动检测技术时,生长板上的形态学变化和图像背景颜色的异质性,包括位于远离图像聚焦平面的组织中较深的细胞(软骨细胞)的微弱存在,以及缺乏细胞特异性特征,都会干扰细胞的识别。我们提出了第一种适用于长骨生长板细胞图像的自动检测和形态测量方法。通过对Retinex方法、各向异性扩散和阈值的特殊顺序应用,我们的新细胞检测算法(CDA)在小鼠生长板的明场显微镜图像上解决了这些挑战。用户根据图像特性选择5个参数来调节CDA。结果表明,数值方法相对于手工方法是有效的。我们的CDA证实了之前关于正常生长板的软骨细胞数量、面积、方向、高度和形状的结果。我们的CDA还证实了先前在荧光图像上发现的基因突变小鼠Smad1/5CKO与对照小鼠之间的差异。CDA旨在通过提高有关软骨细胞排列和特征的数据收集的效率和一致性来帮助生物医学研究。我们的研究结果表明,从生长板的显微镜成像中自动提取数据可以帮助解锁正常和病理发育的信息,这是骨生长潜在生物学机制的关键。
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Determination of Statistical Properties of Microtubule Populations. Fraction of Missing Information (γ) at Different Missing Data Fractions in the 2012 NAMCS Physician Workflow Mail Survey. Determining Sufficient Number of Imputations Using Variance of Imputation Variances: Data from 2012 NAMCS Physician Workflow Mail Survey. Automated Cell Detection and Morphometry on Growth Plate Images of Mouse Bone. The Effect of Ligament Modeling Technique on Knee Joint Kinematics: A Finite Element Study.
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