Computational model for monitoring cholesterol metabolism.

Systems and Synthetic Biology Pub Date : 2014-12-01 Epub Date: 2014-08-01 DOI:10.1007/s11693-014-9152-8
R Selvakumar, M Rashith Muhammad, G Poornima Devi
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引用次数: 1

Abstract

A non-deterministic finite automaton is designed to observe the cholesterol metabolism with the states of acceptance and rejection. The acceptance state of the automaton depicts the normal level of metabolism and production of good cholesterol as an end product. The rejection state of this machine shows the inhibition of enzymatic activity in cholesterol synthesis and removal of free fatty acids. The deficiency in human cholesterol metabolism pathway results in abnormal accumulation of cholesterol in plasma, arterial tissues leading to diseases such as hypercholesterolemia, atherosclerosis respectively and formation of gallstones. The designed machine can be used to monitor the cholesterol metabolism at molecular level through regulation of enzymes involved in the biosynthesis and metabolism of cholesterol for the treatment of diseases incident due to the respective metabolic disorder. In addition, an algorithm for this machine has been developed to compare the programmed string with the given string. This study demonstrates the construction of a machine that is used for the development of molecular targeted therapy for the disorders in cholesterol metabolism.

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监测胆固醇代谢的计算模型。
设计了一个非确定性有限自动机,用于观察接受和拒绝状态下的胆固醇代谢。自动机的接受状态描述了作为最终产物的正常代谢水平和有益胆固醇的产生。这台机器的排斥状态显示抑制胆固醇合成和去除游离脂肪酸的酶活性。人体胆固醇代谢途径缺乏导致胆固醇在血浆、动脉组织中异常积聚,分别导致高胆固醇血症、动脉粥样硬化和胆结石形成等疾病。所设计的机器可以通过调节参与胆固醇生物合成和代谢的酶,在分子水平上监测胆固醇的代谢,从而治疗因代谢紊乱而引起的疾病。此外,还为该机器开发了一种算法,用于将编程字符串与给定字符串进行比较。本研究展示了一种用于开发针对胆固醇代谢紊乱的分子靶向治疗的机器的构建。
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