Niche-dependent genetic diversity in Antarctic metaviromes.

Bacteriophage Pub Date : 2014-12-16 eCollection Date: 2014-01-01 DOI:10.4161/21597081.2014.980125
Olivier Zablocki, Lonnie van Zyl, Evelien M Adriaenssens, Enrico Rubagotti, Marla Tuffin, Stephen C Cary, Don Cowan
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引用次数: 10

Abstract

The metaviromes from 2 different Antarctic terrestrial soil niches have been analyzed. Both hypoliths (microbial assemblages beneath transluscent rocks) and surrounding open soils showed a high level diversity of tailed phages, viruses of algae and amoeba, and virophage sequences. Comparisons of other global metaviromes with the Antarctic libraries showed a niche-dependent clustering pattern, unrelated to the geographical origin of a given metavirome. Within the Antarctic open soil metavirome, a putative circularly permuted, ∼42kb dsDNA virus genome was annotated, showing features of a temperate phage possessing a variety of conserved protein domains with no significant taxonomic affiliations in current databases.

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南极元病毒组中依赖生态位的遗传多样性。
分析了两个不同的南极陆地土壤生态位的后病毒组。在半透明岩石下的微生物组合和周围的开放土壤中,尾状噬菌体、藻类和变形虫病毒以及噬菌体序列都表现出高度的多样性。其他全球元病毒组与南极文库的比较显示出一种依赖于生态位的聚类模式,与给定元病毒组的地理起源无关。在南极开放土壤中,一个假定的循环排列,约42kb的dsDNA病毒基因组被注释,显示出温带噬菌体的特征,具有各种保守的蛋白质结构域,在当前数据库中没有显著的分类关系。
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