[Determination of the Minimal Fragment of the Poliovirus IRES Necessary for the Formation of a Specific Complex with the Human Glycyl-tRNA Synthetase].

Biofizika Pub Date : 2016-03-01
E Yu Nikonova, A O Mihaylina, N V Lekontseva, O S Nikonov, V G Klyashtorny, O V Kravchenko, D E Andreev, I N Shatsky, M B Garber
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Abstract

Aminoacyl-tRNA synthetases are an ancient enzyme family that specifically charge a tRNA molecule with a cognate amino acid required for protein synthesis. Glycyl-tRNA synthetase is one of the most interesting aminoacyl-tRNA synthetases due to its structure variability and functional features in the different organisms. It was shown recently that human glycyl-tRNA synthetase is a regulator of translational initiation of poliovirus mRNA. Details of this process and its mechanism still remain unknown. While exploring this stage of poliovirus functioning we have studied the interaction of the cytoplasmic form of human glycyl-tRNA synthetase and its domains with the fragments of the poliovirus IRES element. As a result, we have identified the minimal fragment of viral mRNA with which glycyl-tRNA synthetase fully interacts and estimated the contribution of some domains to the interaction of glycyl-tRNA synthetase with RNA.

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[确定脊髓灰质炎病毒IRES与人甘酰trna合成酶形成特定复合物所需的最小片段]。
氨基酰基-tRNA合成酶是一种古老的酶家族,它专门为tRNA分子装载蛋白质合成所需的同源氨基酸。甘酰基- trna合成酶是氨基酰基- trna合成酶中最有趣的一种,因为它在不同的生物体中具有结构变异性和功能特征。最近的研究表明,人甘酰trna合成酶是脊髓灰质炎病毒mRNA翻译起始的调节因子。这一过程的细节及其机制尚不清楚。在探索脊髓灰质炎病毒功能的这一阶段时,我们研究了人甘酰trna合成酶的细胞质形式及其结构域与脊髓灰质炎病毒IRES元件片段的相互作用。因此,我们已经确定了与glyyl - trna合成酶完全相互作用的最小病毒mRNA片段,并估计了一些结构域对glyyl - trna合成酶与RNA相互作用的贡献。
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