A glance at the applications of Singular Spectrum Analysis in gene expression data

Q1 Biochemistry, Genetics and Molecular Biology Biomolecular Detection and Quantification Pub Date : 2015-06-01 DOI:10.1016/j.bdq.2015.04.001
Hossein Hassani , Zara Ghodsi
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引用次数: 17

Abstract

In recent years Singular Spectrum Analysis (SSA) has been used to solve many biomedical issues and is currently accepted as a potential technique in quantitative genetics studies. Presented in this article is a review of recent published genetics studies which have taken advantage of SSA. Since Singular Value Decomposition (SVD) is an important stage of this technique which can also be used as an independent analytical method in gene expression data, we also briefly touch upon some areas of the application of SVD. The review finds that at present, the most prominent area of applying SSA in genetics is filtering and signal extraction, which proves that SSA can be considered as a valuable aid and promising method for genetics analysis.

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奇异谱分析在基因表达数据中的应用综述
近年来,奇异谱分析(SSA)已被用于解决许多生物医学问题,是目前公认的一种有潜力的定量遗传学研究技术。本文对最近发表的利用SSA的遗传学研究进行了综述。由于奇异值分解(SVD)是该技术的一个重要阶段,它也可以作为一种独立的分析方法用于基因表达数据,我们还简要地介绍了奇异值分解的一些应用领域。综述发现,目前SSA在遗传学中的应用最突出的领域是滤波和信号提取,这证明SSA可以被认为是一种有价值的辅助和有前途的遗传学分析方法。
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来源期刊
Biomolecular Detection and Quantification
Biomolecular Detection and Quantification Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
14.20
自引率
0.00%
发文量
0
审稿时长
8 weeks
期刊最新文献
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