{"title":"Recent progress in multi-electrode spike sorting methods","authors":"Baptiste Lefebvre , Pierre Yger , Olivier Marre","doi":"10.1016/j.jphysparis.2017.02.005","DOIUrl":null,"url":null,"abstract":"<div><p>In recent years, arrays of extracellular electrodes have been developed and manufactured to record simultaneously from hundreds of electrodes packed with a high density. These recordings should allow neuroscientists to reconstruct the individual activity of the neurons spiking in the vicinity of these electrodes, with the help of signal processing algorithms. Algorithms need to solve a source separation problem, also known as spike sorting. However, these new devices challenge the classical way to do spike sorting. Here we review different methods that have been developed to sort spikes from these large-scale recordings. We describe the common properties of these algorithms, as well as their main differences. Finally, we outline the issues that remain to be solved by future spike sorting algorithms.</p></div>","PeriodicalId":50087,"journal":{"name":"Journal of Physiology-Paris","volume":"110 4","pages":"Pages 327-335"},"PeriodicalIF":0.0000,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.jphysparis.2017.02.005","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Physiology-Paris","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0928425717300098","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 0
Abstract
In recent years, arrays of extracellular electrodes have been developed and manufactured to record simultaneously from hundreds of electrodes packed with a high density. These recordings should allow neuroscientists to reconstruct the individual activity of the neurons spiking in the vicinity of these electrodes, with the help of signal processing algorithms. Algorithms need to solve a source separation problem, also known as spike sorting. However, these new devices challenge the classical way to do spike sorting. Here we review different methods that have been developed to sort spikes from these large-scale recordings. We describe the common properties of these algorithms, as well as their main differences. Finally, we outline the issues that remain to be solved by future spike sorting algorithms.
期刊介绍:
Each issue of the Journal of Physiology (Paris) is specially commissioned, and provides an overview of one important area of neuroscience, delivering review and research papers from leading researchers in that field. The content will interest both those specializing in the experimental study of the brain and those working in interdisciplinary fields linking theory and biological data, including cellular neuroscience, mathematical analysis of brain function, computational neuroscience, biophysics of brain imaging and cognitive psychology.