Protein crystallization: Eluding the bottleneck of X-ray crystallography.

IF 1.1 Q4 BIOPHYSICS AIMS Biophysics Pub Date : 2017-01-01 Epub Date: 2017-09-26 DOI:10.3934/biophy.2017.4.557
Joshua Holcomb, Nicholas Spellmon, Yingxue Zhang, Maysaa Doughan, Chunying Li, Zhe Yang
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引用次数: 27

Abstract

To date, X-ray crystallography remains the gold standard for the determination of macromolecular structure and protein substrate interactions. However, the unpredictability of obtaining a protein crystal remains the limiting factor and continues to be the bottleneck in determining protein structures. A vast amount of research has been conducted in order to circumvent this issue with limited success. No single method has proven to guarantee the crystallization of all proteins. However, techniques using antibody fragments, lipids, carrier proteins, and even mutagenesis of crystal contacts have been implemented to increase the odds of obtaining a crystal with adequate diffraction. In addition, we review a new technique using the scaffolding ability of PDZ domains to facilitate nucleation and crystal lattice formation. Although in its infancy, such technology may be a valuable asset and another method in the crystallography toolbox to further the chances of crystallizing problematic proteins.

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蛋白质结晶:突破x射线晶体学的瓶颈。
迄今为止,x射线晶体学仍然是测定大分子结构和蛋白质底物相互作用的金标准。然而,获得蛋白质晶体的不可预测性仍然是限制因素,并且仍然是确定蛋白质结构的瓶颈。为了规避这个问题,已经进行了大量的研究,但收效甚微。没有一种方法被证明可以保证所有蛋白质的结晶。然而,利用抗体片段、脂质、载体蛋白甚至晶体接触的诱变技术已经实现,以增加获得具有足够衍射的晶体的几率。此外,我们回顾了一种利用PDZ结构域的脚手架能力来促进成核和晶格形成的新技术。虽然这种技术还处于起步阶段,但它可能是一种宝贵的资产,也是晶体学工具箱中的另一种方法,可以进一步提高有问题蛋白质结晶的机会。
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来源期刊
AIMS Biophysics
AIMS Biophysics BIOPHYSICS-
CiteScore
2.40
自引率
20.00%
发文量
16
审稿时长
8 weeks
期刊介绍: AIMS Biophysics is an international Open Access journal devoted to publishing peer-reviewed, high quality, original papers in the field of biophysics. We publish the following article types: original research articles, reviews, editorials, letters, and conference reports. AIMS Biophysics welcomes, but not limited to, the papers from the following topics: · Structural biology · Biophysical technology · Bioenergetics · Membrane biophysics · Cellular Biophysics · Electrophysiology · Neuro-Biophysics · Biomechanics · Systems biology
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