Natural bond orbital analysis of dication magnesium complexes [Mg(H2O)6]2+ and [[Mg(H2O)6](H2O)n]2+; n=1-4

IF 1.1 Q4 BIOPHYSICS AIMS Biophysics Pub Date : 2023-01-01 DOI:10.3934/biophy.2023009
Ganesh Prasad Tiwari, S. Adhikari, H. P. Lamichhane, D. K. Chaudhary
{"title":"Natural bond orbital analysis of dication magnesium complexes [Mg(H2O)6]2+ and [[Mg(H2O)6](H2O)n]2+; n=1-4","authors":"Ganesh Prasad Tiwari, S. Adhikari, H. P. Lamichhane, D. K. Chaudhary","doi":"10.3934/biophy.2023009","DOIUrl":null,"url":null,"abstract":"<abstract> <p>The metal ion is ubiquitous in the human body and is essential to biochemical reactions. The study of the metal ion complexes and their charge transfer nature will be fruitful for drug design and may be beneficial for the extension of the field. In this regard, investigations into charge transport properties from ligands to metal ion complexes and their stability are crucial in the medical field. In this work, the DFT technique has been applied to analyze the delocalization of electrons from the water ligands to a core metal ion. At the B3LYP level of approximation, natural bond orbital (NBO) analysis was performed for the first five distinct complexes [Mg(H<sub>2</sub>O)<sub>6</sub>]<sup>2+</sup> and [[Mg(H<sub>2</sub>O)<sub>6</sub>](H<sub>2</sub>O)<sub>n</sub>]<sup>2+</sup>; n = 1-4. All these complexes were optimized and examined with the higher basis set 6-311++G(d, p). In the complex [Mg(H<sub>2</sub>O)<sub>6</sub>]<sup>2+</sup>, the amount of natural charge transport from ligands towards the metal ion was 0.179e, and the greatest stabilization energy was observed to be 22.67 kcal/mol. The donation of the p orbitals in the hybrid orbitals was increased while approaching the oxygen atoms of H<sub>2</sub>O ligands in the 1<sup>st</sup> coordination sphere with the magnesium ions. The presence of water ligands within the 2<sup>nd</sup> coordination sphere increased natural charge transfer and decreased the stabilizing energy of the complexes. This may be due to the ligand-metal interactions.</p> </abstract>","PeriodicalId":7529,"journal":{"name":"AIMS Biophysics","volume":null,"pages":null},"PeriodicalIF":1.1000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"AIMS Biophysics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3934/biophy.2023009","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOPHYSICS","Score":null,"Total":0}
引用次数: 0

Abstract

The metal ion is ubiquitous in the human body and is essential to biochemical reactions. The study of the metal ion complexes and their charge transfer nature will be fruitful for drug design and may be beneficial for the extension of the field. In this regard, investigations into charge transport properties from ligands to metal ion complexes and their stability are crucial in the medical field. In this work, the DFT technique has been applied to analyze the delocalization of electrons from the water ligands to a core metal ion. At the B3LYP level of approximation, natural bond orbital (NBO) analysis was performed for the first five distinct complexes [Mg(H2O)6]2+ and [[Mg(H2O)6](H2O)n]2+; n = 1-4. All these complexes were optimized and examined with the higher basis set 6-311++G(d, p). In the complex [Mg(H2O)6]2+, the amount of natural charge transport from ligands towards the metal ion was 0.179e, and the greatest stabilization energy was observed to be 22.67 kcal/mol. The donation of the p orbitals in the hybrid orbitals was increased while approaching the oxygen atoms of H2O ligands in the 1st coordination sphere with the magnesium ions. The presence of water ligands within the 2nd coordination sphere increased natural charge transfer and decreased the stabilizing energy of the complexes. This may be due to the ligand-metal interactions.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
氮化镁配合物[Mg(H2O)6]2+和[[Mg(H2O)6](H2O)n]2+的自然键轨道分析n = 1 - 4
金属离子在人体内无处不在,对生物化学反应至关重要。金属离子配合物及其电荷转移性质的研究将为药物设计提供有益的成果,并可能有助于该领域的扩展。在这方面,研究从配体到金属离子配合物的电荷传输性质及其稳定性在医学领域至关重要。在这项工作中,DFT技术已被应用于分析电子从水配体到核心金属离子的离域。在近似的B3LYP水平上,对前五个不同的配合物[Mg(H2O)6]2+和[[Mg(H2O)6](H2O)n]2+进行了自然键轨道(NBO)分析;N = 1-4。在6-311++G(d, p)的高碱基组下对配合物进行了优化和检测。在配合物[Mg(H2O)6]2+中,配体向金属离子的自然电荷输运量为0.179e,最大稳定能为22.67 kcal/mol。当镁离子在第1配位球中接近H2O配体的氧原子时,杂化轨道中p轨道的给能增加。水配体的存在增加了配合物的自然电荷转移,降低了配合物的稳定能。这可能是由于配与金属的相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
AIMS Biophysics
AIMS Biophysics BIOPHYSICS-
CiteScore
2.40
自引率
20.00%
发文量
16
审稿时长
8 weeks
期刊介绍: AIMS Biophysics is an international Open Access journal devoted to publishing peer-reviewed, high quality, original papers in the field of biophysics. We publish the following article types: original research articles, reviews, editorials, letters, and conference reports. AIMS Biophysics welcomes, but not limited to, the papers from the following topics: · Structural biology · Biophysical technology · Bioenergetics · Membrane biophysics · Cellular Biophysics · Electrophysiology · Neuro-Biophysics · Biomechanics · Systems biology
期刊最新文献
Endoplasmic reticulum localization of phosphoinositide specific phospholipase C enzymes in U73122 cultured human osteoblasts Identification of potential SARS-CoV-2 papain-like protease inhibitors with the ability to interact with the catalytic triad Predicting factors and top gene identification for survival data of breast cancer A review of molecular biology detection methods for human adenovirus Natural bond orbital analysis of dication magnesium complexes [Mg(H2O)6]2+ and [[Mg(H2O)6](H2O)n]2+; n=1-4
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1