QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors.

Q1 Chemistry Chemistry Central Journal Pub Date : 2018-03-22 DOI:10.1186/s13065-018-0401-x
Adnane Aouidate, Adib Ghaleb, Mounir Ghamali, Samir Chtita, Abdellah Ousaa, M'barek Choukrad, Abdelouahid Sbai, Mohammed Bouachrine, Tahar Lakhlifi
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引用次数: 7

Abstract

Background: Quantitative structure-activity relationship (QSAR) was carried out to study a series of aminooxadiazoles as PIM1 inhibitors having pki ranging from 5.59 to 9.62 (k i in nM). The present study was performed using Genetic Algorithm method of variable selection (GFA), multiple linear regression analysis (MLR) and non-linear multiple regression analysis (MNLR) to build unambiguous QSAR models of 34 substituted aminooxadiazoles toward PIM1 inhibitory activity based on topological descriptors.

Results: Results showed that the MLR and MNLR predict activity in a satisfactory manner. We concluded that both models provide a high agreement between the predicted and observed values of PIM1 inhibitory activity. Also, they exhibit good stability towards data variations for the validation methods. Furthermore, based on the similarity principle we performed a database screening to identify putative PIM1 candidates inhibitors, and predict their inhibitory activities using the proposed MLR model.

Conclusions: This approach can be easily handled by chemists, to distinguish, which ones among the future designed aminooxadiazoles structures could be lead-like and those that couldn't be, thus, they can be eliminated in the early stages of drug discovery process.

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QSAR研究和基于原始配体的虚拟筛选在寻找氨基二唑衍生物作为PIM1抑制剂中的应用。
背景:采用定量构效关系(QSAR)研究了一系列氨基二唑作为PIM1抑制剂,其pki范围为5.59 ~ 9.62 (k i in nM)。本研究采用遗传算法变量选择法(GFA)、多元线性回归分析(MLR)和非线性多元回归分析(MNLR),基于拓扑描述符建立34种取代氨基二唑类药物对PIM1抑制活性的明确QSAR模型。结果:结果表明,MLR和MNLR能较好地预测脑活动。我们得出结论,这两个模型在PIM1抑制活性的预测值和实测值之间提供了高度的一致性。此外,它们对验证方法的数据变化表现出良好的稳定性。此外,基于相似性原则,我们进行了数据库筛选,以确定推定的PIM1候选抑制剂,并使用所提出的MLR模型预测其抑制活性。结论:该方法可以方便化学家区分未来设计的氨基二唑结构中哪些是类铅结构,哪些不是,从而可以在药物发现过程的早期阶段将其淘汰。
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来源期刊
Chemistry Central Journal
Chemistry Central Journal 化学-化学综合
CiteScore
4.40
自引率
0.00%
发文量
0
审稿时长
3.5 months
期刊介绍: BMC Chemistry is an open access, peer reviewed journal that considers all articles in the broad field of chemistry, including research on fundamental concepts, new developments and the application of chemical sciences to broad range of research fields, industry, and other disciplines. It provides an inclusive platform for the dissemination and discussion of chemistry to aid the advancement of all areas of research. Sections: -Analytical Chemistry -Organic Chemistry -Environmental and Energy Chemistry -Agricultural and Food Chemistry -Inorganic Chemistry -Medicinal Chemistry -Physical Chemistry -Materials and Macromolecular Chemistry -Green and Sustainable Chemistry
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