[Genetic Diversity and Cluster Analysis of Astragalus membranaceus in Gansu Province].

中药材 Pub Date : 2016-06-01
Yi-qin Hou, Yan-ping Zhang, You-tai Shi, Xin-xing Liu, Yu-liang Chen
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Abstract

Objective: To investigate the genetic status of Astragalus membranaceuse resources in Gansu province.

Methods: Using SSR molecular marker technology for collection of Astragalus membranaceuse resources for genetic diversity analysis and clustering analysis.

Results: Nine SSR primers were used on PCR amplification of 57 samples in six main areas of Gansu province,PCR products molecular weighted between 100 ~ 500 bp,the polymorphic loci was 82,the polymorphism rate was 97. 56%,and the average polymorphism information content was 0. 438. At the species level,the number of alleles was 1. 976,the effective number of alleles was 1. 459,Nei’ s genetic diversity was 0. 279,Shannon information index was 0. 431,the group of genetic diversity degree was 0. 248,the genetic differentiation among of population was 0. 117,the gene flow coefficient was 3. 775,and the genetic identity was 0. 896 ~ 0. 977.

Conclusion: Astragalus membranaceuse resources of Gansu are relatively pure,and have abundant genetic diversity. The genetic variation mainly comes from the group of inside,the genes communication between populations is frequent,and the kinship between population is consistent with their geographic distance. In addition,the results of cluster analysis showed that the Core SSR primers can distinguish Astragalus and Hedysarum in the similarity of 0. 46,but Astragalus membranaceus var. mongholicus,Astragalus membranaceus and Astragalus tongolensis can’t be distinguished.

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甘肃省黄芪遗传多样性及聚类分析
目的:了解甘肃省黄芪资源的遗传状况。方法:采用SSR分子标记技术采集黄芪资源,进行遗传多样性分析和聚类分析。结果:利用9条SSR引物对甘肃省6个主要地区的57份样品进行PCR扩增,扩增产物分子量在100 ~ 500 bp之间,多态性位点为82个,多态性率为97。平均多态性信息含量为0。438. 在种水平上,等位基因数为1个。976,有效等位基因数为1。459,Nei的遗传多样性为0。279,香农信息指数为0。431,群体遗传多样性度为0。248,群体间遗传分化为0。117,基因流量系数为3。775,遗传同一性为0。896 ~ 0。977.结论:甘肃黄芪资源相对纯净,遗传多样性丰富。遗传变异主要来自内部群体,种群间基因交流频繁,种群间亲缘关系与地理距离一致。此外,聚类分析结果表明,Core SSR引物能够区分黄芪和红草,相似度为0。但不能区分蒙古黄芪、黄芪和铜绿黄芪。
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期刊介绍: "Chinese Materia Medica" magazine was founded in 1978. It is a national-level academic journal of Chinese medicine science and technology approved by the State Science and Technology Commission and the Press and Publication Administration for public distribution at home and abroad. It is sponsored by the Chinese Materia Medica Information Center of the State Food and Drug Administration and is publicly distributed at home and abroad. It mainly reports on new technologies, new methods and new achievements in the production, scientific research and business management of Chinese medicine, and serves to promote the production and scientific and technological development of Chinese medicine, improve the output and quality of Chinese medicine, improve business management, and prosper the Chinese medicine industry.
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