Xian Xia, Jiahong Li, Zijie Zhou, Dan Wang, Jing Huang, Gejiao Wang
{"title":"High-quality-draft genome sequence of the multiple heavy metal resistant bacterium <i>Pseudaminobacter manganicus</i> JH-7<sup>T</sup>.","authors":"Xian Xia, Jiahong Li, Zijie Zhou, Dan Wang, Jing Huang, Gejiao Wang","doi":"10.1186/s40793-018-0330-2","DOIUrl":null,"url":null,"abstract":"<p><p><i>Pseudaminobacter manganicus</i> JH-7<sup>T</sup> (= KCTC 52258<sup>T</sup> = CCTCC AB 2016107<sup>T</sup>) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine<i>.</i> The strain JH-7<sup>T</sup> shows multiple heavy metal resistance and can effectively remove Mn<sup>2+</sup> and Cd<sup>2+</sup>. In addition, it is able to produce exopolysaccharides (EPS), which may contribute to metal remove/adsorption. Thus, strain JH-7<sup>T</sup> shows a great potential in bioremediation of heavy metal-contaminated environment. In this study, we report the draft genomic sequence of <i>P. manganicus</i> JH-7<sup>T</sup> and compare it to related genomes. Strain JH-7<sup>T</sup> has a 4,842,937 bp genome size with a G + C content of 61.2%, containing 4504 protein-coding genes and 71 RNA genes. A large number of putative genes associated with heavy metal resistance and EPS synthesis are found in the genome.</p>","PeriodicalId":21965,"journal":{"name":"Standards in Genomic Sciences","volume":"13 ","pages":"29"},"PeriodicalIF":0.0000,"publicationDate":"2018-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203287/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Standards in Genomic Sciences","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/s40793-018-0330-2","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2018/1/1 0:00:00","PubModel":"eCollection","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0
Abstract
Pseudaminobacter manganicus JH-7T (= KCTC 52258T = CCTCC AB 2016107T) is a Gram-staining-negative, aerobic and non-motile strain that was isolated from a manganese mine. The strain JH-7T shows multiple heavy metal resistance and can effectively remove Mn2+ and Cd2+. In addition, it is able to produce exopolysaccharides (EPS), which may contribute to metal remove/adsorption. Thus, strain JH-7T shows a great potential in bioremediation of heavy metal-contaminated environment. In this study, we report the draft genomic sequence of P. manganicus JH-7T and compare it to related genomes. Strain JH-7T has a 4,842,937 bp genome size with a G + C content of 61.2%, containing 4504 protein-coding genes and 71 RNA genes. A large number of putative genes associated with heavy metal resistance and EPS synthesis are found in the genome.