High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30T.

Q3 Biochemistry, Genetics and Molecular Biology Standards in Genomic Sciences Pub Date : 2018-11-28 eCollection Date: 2018-01-01 DOI:10.1186/s40793-018-0337-8
Xia Fan, Jingwei Tang, Li Nie, Jing Huang, Gejiao Wang
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Abstract

Mucilaginibacter pedocola TBZ30T (= CCTCC AB 2015301T = KCTC 42833T) is a Gram- negative, rod-shaped, non-motile and non-spore-forming bacterium isolated from a heavy metal contaminated paddy field. It shows resistance to multiple heavy metals and can adsorb/remove Zn2+ and Cd2+ during cultivation. In addition, strain TBZ30T produces exopolysaccharides (EPS). These features make it a great potential to bioremediate heavy metal contamination and biotechnical application. Here we describe the genome sequence and annotation of strain TBZ30T. The genome size is 7,035,113 bp, contains 3132 protein-coding genes (2736 with predicted functions), 50 tRNA encoding genes and 14 rRNA encoding genes. Putative heavy metal resistant genes and EPS associated genes are found in the genome.

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耐重金属和产外源多糖细菌 Mucilaginibacter pedocola TBZ30T 的高质量草图基因组序列。
Mucilaginibacter pedocola TBZ30T(= CCTCC AB 2015301T = KCTC 42833T)是从受重金属污染的稻田中分离出来的一种革兰氏阴性、杆状、无运动性、不形成孢子的细菌。它对多种重金属具有抗性,并能在培养过程中吸附/去除 Zn2+ 和 Cd2+。此外,菌株 TBZ30T 还能产生外多糖(EPS)。这些特点使其在重金属污染的生物修复和生物技术应用方面具有巨大潜力。本文介绍了菌株 TBZ30T 的基因组序列和注释。基因组大小为 7,035,113 bp,包含 3132 个蛋白质编码基因(2736 个具有预测功能)、50 个 tRNA 编码基因和 14 个 rRNA 编码基因。基因组中发现了推定的抗重金属基因和 EPS 相关基因。
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来源期刊
Standards in Genomic Sciences
Standards in Genomic Sciences GENETICS & HEREDITY-MICROBIOLOGY
CiteScore
1.44
自引率
0.00%
发文量
0
审稿时长
6-12 weeks
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