Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential.

Q3 Biochemistry, Genetics and Molecular Biology Standards in Genomic Sciences Pub Date : 2018-11-01 eCollection Date: 2018-01-01 DOI:10.1186/s40793-018-0327-x

Cátia Pinto, Susana Sousa, Hugo Froufe, Conceição Egas, Christophe Clément, Florence Fontaine, Ana C Gomes

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Abstract

Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases.

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具有生物防治潜力的葡萄内生微生物--淀粉芽孢杆菌亚种（Bacillus amyloliquefaciens subsp.

淀粉芽孢杆菌亚种（Bacillus amyloliquefaciens subsp. plantarum）菌株 Fito_F321 是葡萄园中天然存在的一种菌株，具有在葡萄树上定植的能力，对葡萄树上的植物病原菌具有天然的拮抗潜力，其中包括那些导致葡萄植株枯萎病（一种 GTD 疾病）的病原菌。在此，我们报告了淀粉样芽孢杆菌亚种（B. amyloliquefaciens subsp. plantarum Fito_F321 ）的基因组序列草案，该基因组是从贝拉达产区（葡萄牙坎坦赫德）的葡萄品种梅洛叶片中分离出来的。基因组大小为 3,856,229 bp，GC 含量为 46.54%，包含 3697 个蛋白质编码基因、86 个 tRNA 编码基因和 5 个 rRNA 基因。根据菌株 Fito_F321 的基因组草案，可以预测出一组生物活性化合物，如杆菌烯（bacillaene）、苦味素（difficidin）、大内酯（macrolactin）、表面活性素（surfactin）和芬吉霉素（fengycin）。

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