Dynamic Change in Variation of Rubella Viruses Circulating in Mainland China.

Zhen Zhu, Ru Cai, Aili Cui, Yan Zhang, Naiying Mao, Songtao Xu, Yixin Ji, Huiling Wang, Sheng Zhang, Wenbo Xu, Hongwei Wu
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Abstract

We wished to study the dynamic change in variation of rubella viruses circulating during 1999-2015 in mainland China at the molecular level. Molecular evolution of Chinese rubella viruses collected during 1999 ~ 2015 was analyzed according to a surveillance database of measles/rubella laboratory networks in China. A total of 1737 rubella viruses were obtained from 20 of 31 provinces (except Xinjiang and Tibet) during 1999 ~ 2015. Four genotypes (1E, IF, 2A, 2B) were detected. The genotype-1E rubella virus was detected first in 2001. Subsequently, genotype 1E became the predominant genotype circulating during 2001~2013, and could be divided into two closely related clusters (A (2004-2015) and B (2001-2009)). However, the detection rate of the genotype-1E rubella virus decreased year-by-year from 2011, and reached the lowest level (1. 3%) in 2015. The genotype-1F rubella virus was restricted geographically to China, and no longer found after 2002; presumably its circulation in China was interrupted. All genotype-2A rubella viruses were derived from vaccine-related cases. At least four genotypes of 2B rubella viruses (lineage 1 ~ 4) circulated in mainland China during 2000 ~ 2015. The genotype-2B rubella virus was detected sporadically and was in a weak position until 2010. However, the detection rate of imported genotype-2B rubella viruses (lineage 3) was increased and became the predominant genotype during 2014~2015. Through the study of 16 consecutive years in mainland China, the evolution and epidemic situation of the rubella virus was obtained to aid virology surveillance for rubella control in China.

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中国大陆风疹病毒变异的动态变化。
我们希望在分子水平上研究1999-2015年中国大陆风疹病毒流行变异的动态变化。利用中国麻疹/风疹实验室网络监测数据库,对1999 ~ 2015年收集的中国风疹病毒的分子进化进行分析。1999 ~ 2015年在全国31个省(除新疆和西藏)的20个省共检出风疹病毒1737株。检测到4种基因型(1E、IF、2A、2B)。基因型1e风疹病毒于2001年首次被发现。随后,基因型1E成为2001~2013年流行的优势基因型,并可分为两个密切相关的聚类(A(2004-2015)和B(2001-2009))。但基因型1e风疹病毒的检出率自2011年以来逐年下降,达到历史最低水平(1。(3%)。基因型1f风疹病毒在地理上仅限于中国,2002年后不再发现;大概是它在中国的流通中断了。所有基因型2a风疹病毒均来源于疫苗相关病例。2000 ~ 2015年间,至少有4种基因型(1 ~ 4系)在中国大陆流行。基因型2b型风疹病毒是零星发现的,直到2010年都处于弱状态。2014~2015年,输入性基因型2b型风疹病毒(3系)检出率上升,成为主要基因型。通过对中国大陆地区风疹病毒连续16年的研究,获得风疹病毒的演变和流行情况,为中国风疹控制提供病毒学监测依据。
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