X-ray imaging of a water bear offers a new look at tardigrade internal anatomy.

IF 1.7 3区 生物学 Q2 ZOOLOGY Zoological Letters Pub Date : 2019-05-11 eCollection Date: 2019-01-01 DOI:10.1186/s40851-019-0130-6
Vladimir Gross, Mark Müller, Lorenz Hehn, Simone Ferstl, Sebastian Allner, Martin Dierolf, Klaus Achterhold, Georg Mayer, Franz Pfeiffer
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引用次数: 16

Abstract

Background: Tardigrades (water bears) are microscopic invertebrates of which the anatomy has been well studied using traditional techniques, but a comprehensive three-dimensional reconstruction has never been performed. In order to close this gap, we employed X-ray computed tomography (CT), a technique that is becoming increasingly popular in zoology for producing high-resolution, three-dimensional (3D) scans of whole specimens. While CT has long been used to scan larger samples, its use in some microscopic animals can be problematic, as they are often too small for conventional CT yet too large for high-resolution, optics-based soft X-ray microscopy. This size gap continues to be narrowed with advancements in technology, with high-resolution imaging now being possible using both large synchrotron devices and, more recently, laboratory-based instruments.

Results: Here we use a recently developed prototype lab-based nano-computed tomography device to image a 152 μm-long tardigrade at high resolution (200-270 nm pixel size). The resulting dataset allowed us to visualize the anatomy of the tardigrade in 3D and analyze the spatial relationships of the internal structures. Segmentation of the major structures of the body enabled the direct measurement of their respective volumes. Furthermore, we segmented every storage cell individually and quantified their volume distribution. We compare our measurements to those from published studies in which other techniques were used.

Conclusions: The data presented herein demonstrate the utility of CT imaging as a powerful supplementary tool for studies of tardigrade anatomy, especially for quantitative volume measurements. This nanoCT study represents the smallest complete animal ever imaged using CT, and offers new 3D insights into the spatial relationships of the internal organs of water bears.

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水熊的x射线成像为缓步动物的内部解剖提供了新的视角。
背景:缓步动物(水熊)是一种微观无脊椎动物,其解剖结构已经用传统技术进行了很好的研究,但从未进行过全面的三维重建。为了缩小这一差距,我们采用了x射线计算机断层扫描(CT),这项技术在动物学中越来越流行,可以对整个标本进行高分辨率的三维(3D)扫描。虽然CT长期以来一直用于扫描较大的样本,但它在一些微观动物中的应用可能存在问题,因为它们对于传统CT来说太小,而对于基于光学的高分辨率软x射线显微镜来说又太大。随着技术的进步,这种尺寸差距继续缩小,现在可以使用大型同步加速器设备和最近的实验室仪器进行高分辨率成像。结果:本研究使用最新开发的实验室纳米计算机断层扫描设备对152 μm长的水熊虫进行了高分辨率成像(200-270 nm像素尺寸)。由此产生的数据集使我们能够以3D方式可视化水熊虫的解剖结构,并分析其内部结构的空间关系。人体主要结构的分割使其各自体积的直接测量成为可能。此外,我们将每个存储单元单独分割并量化其体积分布。我们将我们的测量结果与已发表的使用其他技术的研究结果进行比较。结论:本文的数据表明,CT成像是缓步动物解剖学研究的有力补充工具,特别是在定量体积测量方面。这项纳米oct研究代表了迄今为止使用CT成像的最小的完整动物,并为水熊内部器官的空间关系提供了新的3D见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Zoological Letters
Zoological Letters Agricultural and Biological Sciences-Animal Science and Zoology
CiteScore
3.60
自引率
0.00%
发文量
12
审稿时长
10 weeks
期刊介绍: Zoological Letters is an open access journal that publishes new and important findings in the zoological sciences. As a sister journal to Zoological Science, Zoological Letters covers a wide range of basic fields of zoology, from taxonomy to bioinformatics. We also welcome submissions of paleontology reports as part of our effort to contribute to the development of new perspectives in evolutionary zoology. Our goal is to serve as a global publishing forum for fundamental researchers in all fields of zoology.
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