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Correction: Scleral appearance is not a correlate of domestication in mammals. 更正:巩膜外观与哺乳动物的驯化无关。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-10-28 DOI: 10.1186/s40851-024-00242-z
Kai R Caspar, Lisa Hüttner, Sabine Begall
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引用次数: 0
Unique bone histology of modern giant salamanders: a study on humeri and femora of Andrias spp. 现代大鲵独特的骨骼组织学:对大鲵肱骨和股骨的研究
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-10-18 DOI: 10.1186/s40851-024-00240-1
Nicole Klein, Dorota Konietzko-Meier, Sudipta Kalita, Masahiro Noda, Sena Ishikawa, Yuki Taguchi, Wataru Anzai, Shoji Hayashi

The osteohistology of Andrias spp. is a pivotal analogue for large fossil non-amniotes (e.g., Temnospondyli), and the endangered status of this taxon underlines the importance of gathering information on its growth. We here present the first osteohistological study by petrographic thin sections of an ontogenetic series of humeri and femora of eight individuals of varying sizes (28.5-104 cm) and ages (2.5-32 years) of Andrias japonicus from the Hiroshima City Asa Zoological Park, Japan. In addition, two individuals of A. cf. davidianus of unknown age but of different size (62 cm and 94 cm) were studied. All samples of Andrias spp. show a primary avascular periosteal cortex made of parallel-fibred tissue around the ossification center in the petrographic thin sections. Mainly in small individuals, the fibers forming this tissue are very coarse and loosely organized. With increasing size and age, the coarse tissue is irregularly intermixed and later replaced with finer and better organized fibers. This histologic change is accompanied by a change from diffuse annuli in the inner cortex to distinct lines of arrested growth (LAGs) in the outer cortex. We interpret these changes in tissue and the appearance of distinct growth marks as indicating the onset of active reproduction. The lack of primary vascularization around the ossification center in our Andrias spp. sample is striking and contradicts other observations. Vascularity may be prone to plasticity and further studies are necessary. We hypothesize that the large osteocyte lacunae and the dense networks of canaliculi observed in our sample may have nourished the tissue instead of primary vascular canals. We measured the size of osteocyte lacunae of Andrias spp. in comparison to other Lissamphibia, and found them to be significantly larger throughout ontogeny. The periosteal cortex contains a high amount of thick Sharpey's fibers all around the midshaft cross sections. The two samples of Andrias cf. davidianus show tissue and growth mark distribution similar to that observed in A. japonicus. However, the large individual of A. cf. davidianus differed in its extremely osteosclerotic condition and the retention of a small layer of calcified cartilage in the endosteal region of the femur. It remains unclear whether these differences are related to plasticity, taxonomy, sex, exogenous factors, or attributable to a regenerated but fully regrown leg. Although the present study is based on zoo-kept and not wild, animals, it yields important insights into osteohistological plasticity and growth patterns in giant salamanders.

Andrias spp.的骨组织学是大型非羊膜动物化石(如Temnospondyli)的一个重要类群,该类群的濒危地位凸显了收集其生长信息的重要性。在此,我们首次对日本广岛市阿萨动物公园出土的 8 个不同大小(28.5-104 厘米)和年龄(2.5-32 岁)的日本鲵(Andrias japonicus)个体的肱骨和股骨进行了薄片岩石学研究。此外,还研究了两只年龄未知但体型不同(62 厘米和 94 厘米)的 A. cf. davidianus。在岩相薄片中,所有 Andrias 样品的骨化中心周围都有由平行纤维组织构成的原生无血管骨膜皮层。主要在小个体中,形成这种组织的纤维非常粗糙,组织松散。随着体型的增大和年龄的增长,粗糙的组织会不规则地混杂在一起,随后会被更细和组织更好的纤维所取代。伴随这一组织学变化的是内皮层中弥漫的环状纤维向外皮层中明显的停止生长线(LAG)的转变。我们将这些组织变化和明显生长标记的出现解释为活跃繁殖的开始。在我们的 Andrias 样品中,骨化中心周围缺乏原生血管,这一点非常惊人,而且与其他观察结果相矛盾。血管可能具有可塑性,有必要进行进一步研究。我们推测,在我们的样本中观察到的大的骨细胞空隙和密集的管网可能是滋养组织的,而不是原生血管管。我们测量了 Andrias 属的骨细胞腔的大小,并与其他 Lissamphibia 进行了比较,发现它们在整个发育过程中都明显更大。骨膜皮层在中轴横截面周围含有大量粗沙比纤维。Andrias cf. davidianus的两个样本显示出的组织和生长标记分布情况与日本A.然而,cf. davidianus大个体的不同之处在于其骨质极度硬化,股骨内骨膜区域保留了一小层钙化软骨。目前还不清楚这些差异是与可塑性、分类学、性别、外源因素有关,还是可归因于再生但完全再生的腿。虽然本研究基于动物园饲养的动物而非野生动物,但它对大鲵的骨组织可塑性和生长模式提供了重要的见解。
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引用次数: 0
The remarkable larval morphology of Rhaebo nasicus (Werner, 1903) (Amphibia: Anura: Bufonidae) with the erection of a new bufonid genus and insights into the evolution of suctorial tadpoles. Rhaebo nasicus (Werner, 1903) (Amphibia: Anura: Bufonidae) 的非凡幼虫形态,建立了一个新的 Bufonid 属,并揭示了蛙类蝌蚪的进化过程。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-09-30 DOI: 10.1186/s40851-024-00241-0
Pedro Henrique Dos Santos Dias, Jackson R Phillips, Martín O Pereyra, D Bruce Means, Alexander Haas, Philippe J R Kok

Tadpoles serve as crucial evidence for testing systematic and taxonomic hypotheses. Suctorial tadpoles collected in Guyana were initially assigned to Rhaebo nasicus through molecular phylogeny. Subsequent analysis of larval and adult morphological traits revealed synapomorphies within the clade encompassing R. nasicus and R. ceratophrys, prompting the recognition of a new genus described herein as Adhaerobufo. The new genus is distinguished from other bufonids by specific phenotypic traits including an enlarged, suctorial oral disc with distinct papillae arrangements, and the presence of certain muscles and narial vacuities at the larval stage. However, only a few adult external characteristics (e.g., enlarged eyelids, infraocular cream spot), seem to be reliably discriminative from related genera. This study underscores the significance of larval morphology in anuran systematics and offers new insights into the evolution of suctorial and gastromyzophorous larvae within bufonids.

蝌蚪是检验系统学和分类学假设的重要证据。通过分子系统发育,在圭亚那采集的鞘翅目蝌蚪最初被归入Rhaebo nasicus。随后对幼体和成体形态特征的分析表明,在包括 R. nasicus 和 R. ceratophrys 的支系中存在同形异构现象,这促使人们认识到一个新的属,即本文描述的 Adhaerobufo 属。这一新属与其他布福类的区别在于其特殊的表型特征,包括扩大的扇形口盘和独特的乳突排列,以及幼虫阶段存在某些肌肉和腹膜空泡。然而,只有少数成虫的外部特征(如增大的眼睑、眼下奶油斑)似乎能可靠地与相关属区分开来。这项研究强调了幼虫形态学在无尾目动物系统学中的重要意义,并为了解布氏无尾目动物中套肠幼虫和胃口幼虫的进化提供了新的视角。
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引用次数: 0
Disparity of metatibial and metatarsal cuticular and sensory structures in Cixiidae (Hemiptera: Fulgoromorpha) with a metatibiotarsal diagnosis for the tribes. Cixiidae(半翅目:Fulgoromorpha)跖骨和跖骨角质层及感觉结构的差异与跖胫跖骨诊断。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-08-26 DOI: 10.1186/s40851-024-00239-8
Jolanta Brożek, Adam Stroiński, Anna Romaniak, Thierry Bourgoin

A review of the cuticular and sensory metatibial and metatarsal structures in cixiid planthoppers (Hemiptera: Fulgoromorpha) is proposed, depicting both their strong disparity and the great diversity of the patterns observed. Terminology and definitions for these structures are provided. The so-called lateral teeth of the metatibia in fact are particular styloconic sensory structures, called spiniform sensilla in Cixiidae. The apical metatibiotarsal teeth are non-sensory cuticular expansions, often bearing one or several chaetic sensilla ventrally, generally distributed in an internal and an external group of three teeth each, in some instances separated by a diastema; innermost and outermost teeth are generally larger. On the first tarsomere seven to eight teeth generally occur in one row, although two rows are observed in Brixidiini. A strong diversity of conformations and patterns is observed in the second metatarsomere. A specific subdorsal sensillum, of platellar type, may be present in the first metatarsomere teeth for a few taxa. It is generally present in the second metatarsomere, either as a narrow-based acutellar sensillum or as a broad-based platellar sensillum according to the taxon. Scanning electron microscope (SEM) analyses of 54 species of cixiids from all described tribes of the family, supplemented by data from the literature, are used to provide a metatibiotarsal diagnosis for each of the tribes of Cixiidae. In the state of our knowledge of the sufficiently precise observations of metatibiotarsal structures in the Cixiidae which are available, and of the phylogeny of the group as a frame of reference for their interpretations, we note that the observed patterns are probably the result of multiple and independent convergences and evolutionary regressions. These occurred at all levels of cixiid classification. Although these patterns can be useful in the identification of taxa at a low taxonomic level, they would be less useful for phylogenetic approaches.

本文对慈溪蝇(半翅目:Fulgoromorpha)的角质和感觉跖骨和跖骨结构进行了综述,描绘了它们之间的巨大差异以及所观察到的模式的巨大多样性。文中提供了这些结构的术语和定义。所谓的跖侧齿实际上是一种特殊的花柱感觉结构,在菊科中被称为刺状感觉器。跖骨顶端的齿是非感觉性的角质层扩张,腹侧通常带有一个或几个链状感觉器,一般分布在内外两组,每组有三个齿,在某些情况下被一个间隙隔开;最里面和最外面的齿一般较大。在第一跗节上,七到八个齿通常排成一行,但在 Brixidiini 身上可以看到两行。在第二跖骨上可以观察到非常多样的构型和模式。少数类群的第一跖骨齿中可能会有一个特殊的背下感觉器,属于板状类型。根据类群的不同,第二跖齿中一般会有窄基尖状感觉器或宽基板状感觉器。本研究利用扫描电子显微镜(SEM)分析了慈溪科所有已描述支系中的 54 个物种,并辅以文献数据,为慈溪科的每个支系提供了跖跗关节诊断。根据我们现有的对慈溪科跖跗关节结构的足够精确的观察结果,以及作为解释参考框架的慈溪科系统发育情况,我们注意到观察到的模式可能是多重和独立的趋同和进化回归的结果。这些现象发生在慈溪虫分类的各个层次。虽然这些模式有助于在较低的分类学水平上识别类群,但对于系统发生学方法来说,它们的作用较小。
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引用次数: 0
The burrower bug Macroscytus japonensis (Hemiptera: Cydnidae) acquires obligate symbiotic bacteria from the environment. 穴居蝽(Macroscytus japonensis)(半翅目:穴居蝽科)从环境中获取强制性共生细菌。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-08-02 DOI: 10.1186/s40851-024-00238-9
Takuma Nakawaki, Shuto Watanabe, Takahiro Hosokawa

Many plant-feeding stinkbugs belonging to the infraorder Pentatomomorpha possess a specialized symbiotic organ at the posterior end of the midgut, in which mutualistic bacterial symbionts are harbored extracellularly. In species of the superfamily Pentatomoidea, these symbionts typically are verticallytransmitted from host mothers to offspring, whereas in species of the superfamilies Coreoidea and Lygaeoidea they are acquired from the environment. In the pentatomoid family Cydnidae, vertical symbiont transmission has been reported in several species. Here, we report the first case of environmental symbiont acquisition in Cydnidae, observed in the burrower bug Macroscytus japonensis. A comprehensive survey of 72 insect samples from 23 sites across the Japanese archipelago revealed that (1) symbionts exhibit remarkably high diversity, forming six distinct phylogenetic groups within the Enterobacteriaceae of the γ-Proteobacteria, (2) most symbionts are cultivable and closely related to free-living Pantoea-allied bacteria, and (3) symbiont phylogenetic groups do not reflect the host phylogeny. Microbial inspection of eggs revealed the absence of bacteria on the egg surface. These results strongly suggest that symbionts are acquired from the environment, not vertical transmission. Rearing experiments confirmed environmental symbiont acquisition. When environmental symbiont sources were experimentally withheld, nymphs became aposymbiotic and died before molting to the second instar, indicating that nymphs environmentally acquire symbionts during the first-instar stage and that symbionts are essential for nymphal growth and survival. This study highlights Cydnidae as the only pentatomoid family that includes species that environmentally acquire symbionts and those that vertically transmit symbionts, providing an ideal platform for comparative studies of the ecological and environmental factors that influence the evolution of symbiont transmission modes.

五目蝽亚目中的许多以植物为食的蝽类在中肠的后端都有一个专门的共生器官,在这个器官中,细胞外藏有互生的细菌共生体。在五膜虫超科的物种中,这些共生体通常从宿主母体垂直传播给后代,而在核心虫超科和Lygaeoidea超科的物种中,这些共生体是从环境中获得的。据报道,在五触角虫科(Cydnidae)的多个物种中,共生体都是垂直传播的。在这里,我们报告了在穴居昆虫日本穴居蝇(Macroscytus japonensis)中观察到的第一个穴居昆虫环境共生体获取案例。我们对日本列岛 23 个地点的 72 个昆虫样本进行了全面调查,结果发现:(1)共生体表现出极高的多样性,在γ-蛋白质细菌的肠杆菌科中形成了六个不同的系统发育群;(2)大多数共生体是可培养的,与自由生活的泛变形菌密切相关;(3)共生体系统发育群并不反映宿主的系统发育。对卵进行微生物检查后发现,卵表面没有细菌。这些结果有力地表明,共生体是从环境中获得的,而不是垂直传播。饲养实验证实了共生体是从环境中获得的。当实验性地切断环境共生体来源时,若虫在蜕皮至第二龄期之前变得无共生能力并死亡,这表明若虫在第一龄期从环境中获得共生体,共生体对若虫的生长和生存至关重要。这项研究表明,蝶形花科是唯一一个包括从环境中获得共生体的物种和垂直传播共生体的物种的五蠹科,为比较研究影响共生体传播模式演化的生态和环境因素提供了一个理想的平台。
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引用次数: 0
Head in the clouds: two new microendemic tepui-summit species of Stefania (Anura: Hemiphractidae). 云中的头颅:Stefania 的两个新的微地方性特培-高峰物种(Anura: Hemiphractidae)。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-08-01 DOI: 10.1186/s40851-024-00237-w
Philippe J R Kok

In addition to the type locality (the summit of Aprada-tepui, Bolívar State of Venezuela), the distribution of the egg-brooding frog Stefania satelles was long thought to include several isolated tabletop mountain (tepui) summits surrounding the large Chimantá Massif in Bolívar State (hence the Latin name "satelles"). However, multilocus molecular phylogenetic analyses have revealed that this taxon includes several undescribed morphologically cryptic species, and that S. satelles should be restricted to its type locality. Two tepui-summit species confused under that name in the literature remain to be named, and the present paper aims at describing these populations previously referred to as Stefania sp. 3 and S. sp. 5. Stefania sp. 3 is only known from the small summit of Angasima-tepui, while S. sp. 5 is only reported from the small summit of Upuigma-tepui, both mountains being located south of the Chimantá Massif. These new, phylogenetically distinct species are described based on external morphology and osteology and in comparison to close relatives in the S. ginesi clade, which consists exclusively of tepui summit species. Both new species have highly restricted geographic ranges (less than 3 km2) and should be listed as Critically Endangered according to IUCN criteria.

除了模式产地(委内瑞拉玻利瓦尔州 Aprada-tepui 山顶)之外,人们长期以来一直认为卵生蛙 Stefania satelles 的分布范围还包括玻利瓦尔州 Chimantá 大丘陵周围几个孤立的桌面山(tepui)山顶(因此拉丁名为 "satelles")。然而,多焦点分子系统发育分析表明,该分类群包括几个未描述的形态隐蔽种,S. satelles 应仅限于其模式产地。本文旨在描述这两个以前被称为 Stefania sp.Stefania sp. 3仅见于Angasima-tepui的小山顶,而S. sp. 5仅见于Upuigma-tepui的小山顶,这两座山均位于奇曼塔山丘的南部。根据外部形态学和骨学以及与 S. ginesi 支系近亲的比较,描述了这些在系统发育上不同的新物种,S. ginesi 支系仅由 tepui 山顶物种组成。这两个新物种的地理分布范围非常有限(小于 3 平方公里),根据世界自然保护联盟的标准,应将其列为极危物种。
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引用次数: 0
Systematics and phylogeny of the entomopathogenic nematobacterial complexes Steinernema-Xenorhabdus and Heterorhabditis-Photorhabdus. 昆虫病原线虫复合体 Steinernema-Xenorhabdus 和 Heterorhabditis-Photorhabdus 的系统学和系统发育。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-07-17 DOI: 10.1186/s40851-024-00235-y
Vladimír Půža, Ricardo A R Machado

Entomopathogenic nematodes of the genera Steinernema and Heterorhabditis, along with their bacterial symbionts from the genera Xenorhabdus and Photorhabdus, respectively, are important biological control agents against agricultural pests. Rapid progress in the development of genomic tools has catalyzed a transformation of the systematics of these organisms, reshaping our understanding of their phylogenetic and cophlylogenetic relationships. In this review, we discuss the major historical events in the taxonomy and systematics of this group of organisms, highlighting the latest advancements in these fields. Additionally, we synthesize information on nematode-bacteria associations and assess the existing evidence regarding their cophylogenetic relationships.

Steinernema 属和 Heterorhabditis 属的昆虫致病线虫以及它们的细菌共生体 Xenorhabdus 属和 Photorhabdus 属分别是防治农业害虫的重要生物控制剂。基因组工具的快速发展推动了这些生物系统学的变革,重塑了我们对其系统发育和同源关系的认识。在这篇综述中,我们讨论了这组生物在分类学和系统学方面的重大历史事件,重点介绍了这些领域的最新进展。此外,我们还综合了线虫-细菌关联的信息,并评估了有关它们同源关系的现有证据。
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引用次数: 0
Proteins from shrews' venom glands play a role in gland functioning and venom production. 鼩鼱毒腺中的蛋白质在毒腺功能和毒液生产中发挥作用。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-07-15 DOI: 10.1186/s40851-024-00236-x
Krzysztof Kowalski, Paweł Marciniak, K Anne-Isola Nekaris, Leszek Rychlik

Venom production has evolved independently many times in the animal kingdom, although it is rare among mammals. Venomous shrews produce venom in their submandibular salivary glands and use it for food acquisition. Only a few toxins have been identified in shrew venoms thus far, and their modes of action require investigation. The biological and molecular processes relating to venom production and gland functioning also remain unknown. To address this gap, we investigated protein content in extracts from venom glands of two shrew species, Neomys fodiens and Sorex araneus, and interpreted their biological functions. Applying a proteomic approach coupled with Gene Ontology enrichment analysis, we identified 313 and 187 putative proteins in venom glands of N. fodiens and S. araneus, respectively. A search of the UniProt database revealed that most of the proteins found in both shrew species were involved in metabolic processes and stress response, while GO enrichment analysis revealed more stress-related proteins in the glands of S. araneus. Molecules that regulate molecule synthesis, cell cycles, and cell divisions are necessary to enable venom regeneration and ensure its effectiveness in predation and food hoarding. The presence of proteins involved in stress response may be the result of shrews' high metabolic rate and the costs of venom replenishment. Some proteins are likely to promote toxin spreading during envenomation and, due to their proteolytic action, reinforce venom toxicity. Finally, finding numerous proteins involved in immune response suggests a potential role of shrew venom gland secretions in protection against pathogens. These findings open up new perspectives for studying biological functions of molecules from shrew venom glands and extend our knowledge on the functioning of eulipotyphlan venom systems. Because the majority of existing and putative venomous mammals use oral venom systems to inject venom into target species, the methods presented here provide a promising avenue for confirming or discovering new taxa of venomous mammals.

毒液的产生在动物界中多次独立进化,但在哺乳动物中却很少见。毒鼩鼱在颌下唾液腺中分泌毒液,并利用毒液获取食物。迄今为止,只在鼩鼱毒液中发现了几种毒素,它们的作用方式还需要研究。与毒液产生和腺体功能有关的生物和分子过程也仍然未知。为了填补这一空白,我们研究了两种鼩鼱(Neomys fodiens和Sorex araneus)毒腺提取物中的蛋白质含量,并解读了它们的生物功能。通过蛋白质组学方法和基因本体富集分析,我们在 N. fodiens 和 S. araneus 的毒腺中分别发现了 313 和 187 个假定蛋白质。对 UniProt 数据库的检索显示,在这两种鼩鼱体内发现的大多数蛋白质都参与了新陈代谢过程和应激反应,而 GO 富集分析则显示在 S. araneus 的毒腺中发现了更多与应激反应有关的蛋白质。调控分子合成、细胞周期和细胞分裂的分子是毒液再生的必要条件,也是确保毒液在捕食和囤积食物过程中的有效性的必要条件。鼩鼱的新陈代谢率很高,毒液补充的成本也很高,因此可能存在涉及应激反应的蛋白质。有些蛋白质可能会在鼩鼱中毒时促进毒素扩散,并由于其蛋白质分解作用而加强毒液的毒性。最后,发现大量参与免疫反应的蛋白质表明,鼩鼱毒腺分泌物在抵御病原体方面具有潜在作用。这些发现为研究鼩鼱毒腺分子的生物功能开辟了新的视角,并扩展了我们对鼩鼱毒腺系统功能的认识。由于大多数现有的和推测的有毒哺乳动物都使用口腔毒液系统向目标物种注射毒液,因此本文介绍的方法为确认或发现有毒哺乳动物的新类群提供了一个很有希望的途径。
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引用次数: 0
Sexual dimorphism in the tardigrade Paramacrobiotus metropolitanus transcriptome. 沙门氏菌转录组的性双态性。
IF 1.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-06-20 DOI: 10.1186/s40851-024-00233-0
Kenta Sugiura, Yuki Yoshida, Kohei Hayashi, Kazuharu Arakawa, Takekazu Kunieda, Midori Matsumoto

Background: In gonochoristic animals, the sex determination pathway induces different morphological and behavioral features that can be observed between sexes, a condition known as sexual dimorphism. While many components of this sex differentiation cascade show high levels of diversity, factors such as the Doublesex-Mab-3-Related Transcription factor (DMRT) are widely conserved across animal taxa. Species of the phylum Tardigrada exhibit remarkable diversity in morphology and behavior between sexes, suggesting a pathway regulating this dimorphism. Despite the wealth of genomic and zoological knowledge accumulated in recent studies, the sexual differences in tardigrades genomes have not been identified. In the present study, we focused on the gonochoristic species Paramacrobiotus metropolitanus and employed omics analyses to unravel the molecular basis of sexual dimorphism.

Results: Transcriptome analysis between sex-identified specimens revealed numerous differentially expressed genes, of which approximately 2,000 male-biased genes were focused on 29 non-male-specific genomic loci. From these regions, we identified two Macrobiotidae family specific DMRT paralogs, which were significantly upregulated in males and lacked sex specific splicing variants. Furthermore, phylogenetic analysis indicated all tardigrade genomes lack the doublesex ortholog, suggesting doublesex emerged after the divergence of Tardigrada. In contrast to sex-specific expression, no evidence of genomic differences between the sexes was found. We also identified several anhydrobiosis genes that exhibit sex-biased expression, suggesting a possible mechanism for protection of sex-specific tissues against extreme stress.

Conclusions: This study provides a comprehensive analysis for analyzing the genetic differences between sexes in tardigrades. The existence of male-biased, but not male-specific, genomic loci and identification of the family specific male-biased DMRT subfamily provides the foundation for understanding the sex determination cascade. In addition, sex-biased expression of several tardigrade-specific genes which are involved their stress tolerance suggests a potential role in protecting sex-specific tissue and gametes.

背景:在性腺动物中,性别决定途径会诱导不同性别的动物出现不同的形态和行为特征,这种情况被称为性二态。虽然这种性别分化级联的许多成分显示出高度的多样性,但诸如双性-Mab-3相关转录因子(DMRT)等因子在动物分类群中却具有广泛的保守性。迟发型动物门的物种在形态和行为上表现出显著的性别差异,这表明存在一种调节这种二态性的途径。尽管近年来的研究积累了丰富的基因组学和动物学知识,但迟发型动物基因组中的性别差异尚未被确定。在本研究中,我们以性腺异形物种大都副蛛为研究对象,采用全局分析方法来揭示性二态性的分子基础:结果:性别鉴定标本之间的转录组分析揭示了大量差异表达基因,其中约 2,000 个雄性偏向基因集中在 29 个非雄性特异性基因组位点上。从这些区域中,我们发现了两个Macrobiotidae家族特有的DMRT旁系亲属,它们在雄性动物中的表达量明显升高,且缺乏性别特异性剪接变异。此外,系统进化分析表明,所有迟发型动物的基因组都缺乏双性同源物,这表明双性同源物是在迟发型动物分化后出现的。与性别特异性表达不同,我们没有发现性别间基因组差异的证据。我们还发现了几个表现出性别表达差异的水生物基因,这可能是一种保护性别特异性组织免受极端压力的机制:结论:这项研究为分析沙蜥性别间的遗传差异提供了一个全面的分析方法。存在雄性偏向而非雄性特异的基因组位点,并确定了科特有的雄性偏向 DMRT 亚家族,为了解性别决定级联奠定了基础。此外,几种迟发型特异基因的性别偏向表达涉及它们的应激耐受性,这表明它们在保护性别特异性组织和配子方面发挥着潜在的作用。
{"title":"Sexual dimorphism in the tardigrade Paramacrobiotus metropolitanus transcriptome.","authors":"Kenta Sugiura, Yuki Yoshida, Kohei Hayashi, Kazuharu Arakawa, Takekazu Kunieda, Midori Matsumoto","doi":"10.1186/s40851-024-00233-0","DOIUrl":"10.1186/s40851-024-00233-0","url":null,"abstract":"<p><strong>Background: </strong>In gonochoristic animals, the sex determination pathway induces different morphological and behavioral features that can be observed between sexes, a condition known as sexual dimorphism. While many components of this sex differentiation cascade show high levels of diversity, factors such as the Doublesex-Mab-3-Related Transcription factor (DMRT) are widely conserved across animal taxa. Species of the phylum Tardigrada exhibit remarkable diversity in morphology and behavior between sexes, suggesting a pathway regulating this dimorphism. Despite the wealth of genomic and zoological knowledge accumulated in recent studies, the sexual differences in tardigrades genomes have not been identified. In the present study, we focused on the gonochoristic species Paramacrobiotus metropolitanus and employed omics analyses to unravel the molecular basis of sexual dimorphism.</p><p><strong>Results: </strong>Transcriptome analysis between sex-identified specimens revealed numerous differentially expressed genes, of which approximately 2,000 male-biased genes were focused on 29 non-male-specific genomic loci. From these regions, we identified two Macrobiotidae family specific DMRT paralogs, which were significantly upregulated in males and lacked sex specific splicing variants. Furthermore, phylogenetic analysis indicated all tardigrade genomes lack the doublesex ortholog, suggesting doublesex emerged after the divergence of Tardigrada. In contrast to sex-specific expression, no evidence of genomic differences between the sexes was found. We also identified several anhydrobiosis genes that exhibit sex-biased expression, suggesting a possible mechanism for protection of sex-specific tissues against extreme stress.</p><p><strong>Conclusions: </strong>This study provides a comprehensive analysis for analyzing the genetic differences between sexes in tardigrades. The existence of male-biased, but not male-specific, genomic loci and identification of the family specific male-biased DMRT subfamily provides the foundation for understanding the sex determination cascade. In addition, sex-biased expression of several tardigrade-specific genes which are involved their stress tolerance suggests a potential role in protecting sex-specific tissue and gametes.</p>","PeriodicalId":54280,"journal":{"name":"Zoological Letters","volume":"10 1","pages":"11"},"PeriodicalIF":1.7,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11191345/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141433275","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Boring life: early colony formation and growth in the endolithic bryozoan genus Penetrantia Silén, 1946. 镗孔生命:内石孔虫属 Penetrantia Silén, 1946 年的早期群落形成和生长。
IF 2.7 3区 生物学 Q2 ZOOLOGY Pub Date : 2024-06-14 DOI: 10.1186/s40851-024-00234-z
Sebastian H Decker, Sarah Lemer, Simone Decker, Masato Hirose, Mildred J Johnson, Thomas Schwaha

As in most colonial and sessile marine invertebrates, bryozoan life history is characterized by asexual propagation of zooids for colonial growth and by sexual production of larvae for dispersal. However, comprehensive life histories, particularly in cryptic species such as endolithic (boring) bryozoans, remain poorly understood. The ctenostome family Penetrantiidae is widespread from temperate to tropical waters and often found in molluscan shells, offering an opportunity to study the boring lifestyle and its potential impact on bioerosion through growth and settlement experiments. Our research focused on Penetrantia clionoides from Guam in the Pacific Ocean, Penetrantia japonica from Japan, and a Penetrantia species from France in the Atlantic Ocean. We found distinct life histories and reproductive patterns potentially influenced by environmental factors such as temperature and food availability. The tropical P. clionoides displayed higher rates of larval production and growth compared to its temperate counterpart. For instance, the mean stolon extension was 335.2 μm/week in P. clionoides versus 232.1 μm/week in Penetrantia sp. Autozooid development took 13 days in P. clionoides and 31 days in Penetrantia sp. Anatomical features like apertural rims aided in species identification and in understanding larval settlement preferences, suggesting a tendency for philopatric settlement behavior. The bioerosional impact of penetrantiids remains little understood, but we generated first projections of bioerosion rates and a protocol for keeping Penetrantia under laboratory conditions, laying a foundation for further research in this field.

与大多数群居和无柄海洋无脊椎动物一样,红孔虫生活史的特点是无性繁殖动物体以促进群居生长,以及有性繁殖幼虫以进行传播。然而,人们对其全面的生活史,尤其是对隐蔽物种(如内石(钻孔)双壳类)的生活史仍然知之甚少。栉水母科(Penetrantiidae)广泛分布于温带到热带水域,经常在软体动物的贝壳中发现,这为通过生长和沉降实验来研究穴居生活方式及其对生物侵蚀的潜在影响提供了机会。我们的研究重点是太平洋关岛的 Penetrantia clionoides、日本的 Penetrantia japonica 和大西洋法国的一种 Penetrantia。我们发现,不同的生活史和繁殖模式可能受到温度和食物供应等环境因素的影响。热带的 P. clionoides 与温带的 P. clionoides 相比,显示出更高的幼虫生产率和生长率。例如,P. clionoides 的平均匍匐茎延伸率为 335.2 μm/周,而 Penetrantia sp 的平均匍匐茎延伸率为 232.1 μm/周。人们对穿孔虫的生物侵蚀作用仍然知之甚少,但我们首次预测了生物侵蚀率,并制定了在实验室条件下饲养穿孔虫的方案,为这一领域的进一步研究奠定了基础。
{"title":"Boring life: early colony formation and growth in the endolithic bryozoan genus Penetrantia Silén, 1946.","authors":"Sebastian H Decker, Sarah Lemer, Simone Decker, Masato Hirose, Mildred J Johnson, Thomas Schwaha","doi":"10.1186/s40851-024-00234-z","DOIUrl":"10.1186/s40851-024-00234-z","url":null,"abstract":"<p><p>As in most colonial and sessile marine invertebrates, bryozoan life history is characterized by asexual propagation of zooids for colonial growth and by sexual production of larvae for dispersal. However, comprehensive life histories, particularly in cryptic species such as endolithic (boring) bryozoans, remain poorly understood. The ctenostome family Penetrantiidae is widespread from temperate to tropical waters and often found in molluscan shells, offering an opportunity to study the boring lifestyle and its potential impact on bioerosion through growth and settlement experiments. Our research focused on Penetrantia clionoides from Guam in the Pacific Ocean, Penetrantia japonica from Japan, and a Penetrantia species from France in the Atlantic Ocean. We found distinct life histories and reproductive patterns potentially influenced by environmental factors such as temperature and food availability. The tropical P. clionoides displayed higher rates of larval production and growth compared to its temperate counterpart. For instance, the mean stolon extension was 335.2 μm/week in P. clionoides versus 232.1 μm/week in Penetrantia sp. Autozooid development took 13 days in P. clionoides and 31 days in Penetrantia sp. Anatomical features like apertural rims aided in species identification and in understanding larval settlement preferences, suggesting a tendency for philopatric settlement behavior. The bioerosional impact of penetrantiids remains little understood, but we generated first projections of bioerosion rates and a protocol for keeping Penetrantia under laboratory conditions, laying a foundation for further research in this field.</p>","PeriodicalId":54280,"journal":{"name":"Zoological Letters","volume":"10 1","pages":"10"},"PeriodicalIF":2.7,"publicationDate":"2024-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11179354/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141322011","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Zoological Letters
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