A computational framework for evaluating molecular dynamics potential parameters employing quantum mechanics†

IF 3.2 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Molecular Systems Design & Engineering Pub Date : 2023-02-02 DOI:10.1039/D3ME00007A
Amirmasoud Lanjan, Zahra Moradi and Seshasai Srinivasan
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引用次数: 2

Abstract

Molecular dynamics (MD) and quantum mechanics (QM) calculations can be used to characterize novel materials and phenomena that experimental methods cannot capture. While QM provides accurate results, it has high computational costs and is applicable only to small system sizes. On the other hand, MD can work with larger systems and has better computational efficiency but is incapable of studying novel materials/phenomena due to its dependency on experimental data in the literature. Therefore, complex systems such as solid–electrolyte interface (SEI) layer formation cannot be comprehensively investigated by (I) experimental methods due to small time scales, (II) MD simulations because of the absence of experimental data, and (III) QM calculations due to the relatively large system. Herein, we report a suite of new nano-scale algorithms to facilitate studying complex material interphases and molecular systems with the accuracy and precision of QM calculations and at a speed and system size permissible using MD simulations. Our formulation addresses the most challenging aspect of performing an MD simulation, i.e., finding accurate potential (force field) parameters that are often derived from experimental methods. The computational framework presented in this work consists of seven main functions/algorithms that collectively help us account for the effects of nonbonded, bonded, angle, dihedral, and improper interactions in a system/molecule. It is now possible to use these simulations to design and study wholly new and novel materials and investigate phenomena at an atomic/molecular scale under different conditions without the need for prior experimental investigations. We have successfully validated our algorithms with respect to the experimental data of established materials such as H2O (a polar molecule), LiPF6 (an ionic compound), C2H5OH (ethanol), C8H18 (a long chain molecule), and ethylene carbonate (EC) (a complex molecular system). The obtained results have an accuracy of over 90%.

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应用量子力学评价分子动力学势参数的计算框架[j]
分子动力学(MD)和量子力学(QM)计算可用于表征实验方法无法捕获的新材料和现象。虽然QM提供了准确的结果,但它具有很高的计算成本,并且仅适用于小系统尺寸。另一方面,MD可以与更大的系统一起工作,并且具有更好的计算效率,但由于依赖文献中的实验数据,因此无法研究新的材料/现象。因此,固体电解质界面(SEI)层形成等复杂系统无法通过(I)时间尺度小的实验方法进行全面研究,(II)缺乏实验数据的MD模拟,以及(III)系统相对较大的QM计算。在此,我们报告了一套新的纳米尺度算法,用于研究复杂的材料界面和分子系统,具有QM计算的准确性和精度,并且在使用MD模拟允许的速度和系统尺寸下。我们的配方解决了MD模拟中最具挑战性的方面,即找到准确的势(力场)参数,这些参数通常来自实验方法。本工作中提出的计算框架由七个主要功能/算法组成,它们共同帮助我们解释系统/分子中非键、键、角、二面体和不当相互作用的影响。现在可以使用这些模拟来设计和研究全新的材料,并在不同条件下研究原子/分子尺度上的现象,而无需事先进行实验研究。我们已经成功地验证了我们的算法与既定材料的实验数据,如H2O(极性分子),LiPF6(离子化合物),C2H5OH(乙醇),C8H18(长链分子)和乙烯碳酸酯(EC)(一个复杂的分子系统)。所得结果的准确度在90%以上。
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来源期刊
Molecular Systems Design & Engineering
Molecular Systems Design & Engineering Engineering-Biomedical Engineering
CiteScore
6.40
自引率
2.80%
发文量
144
期刊介绍: Molecular Systems Design & Engineering provides a hub for cutting-edge research into how understanding of molecular properties, behaviour and interactions can be used to design and assemble better materials, systems, and processes to achieve specific functions. These may have applications of technological significance and help address global challenges.
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