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Correction: Describing the adsorption of doxorubicin on a PAMAM dendrimer by ab initio calculations 更正:通过从头计算描述阿霉素在PAMAM树状大分子上的吸附
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-08-24 DOI: 10.1039/D3ME90030D
Handriela Hoff de Oliveira Sobrinho, Renato Eising and Ernesto Osvaldo Wrasse

Correction for ‘Describing the adsorption of doxorubicin on a PAMAM dendrimer by ab initio calculations’ by Handriela Hoff de Oliveira Sobrinho et al., Mol. Syst. Des. Eng., 2023, https://doi.org/10.1039/d3me00060e.

Handriela Hoff de Oliveira Sobrinho等人,Mol.Syst。Des。Eng.,2023,https://doi.org/10.1039/d3me00060e.
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引用次数: 0
Graphene in rubber formulations: a comprehensive review and performance optimization insights 橡胶配方中的石墨烯:全面综述和性能优化见解
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-08-23 DOI: 10.1039/D3ME00082F
Y. L. Leong, H. N. Lim and I. Ibrahim

Graphene is widely incorporated into rubber matrices to enhance mechanical, electrical, and thermal properties in nanocomposites. However, its hydrophobicity and lack of functionalities cause agglomeration, impacting nanocomposite properties. Intense agitation techniques like mechanical blending, grinding, and sonication modify graphene and disrupt π–π interactions between sheets. Hybrid fillers, such as carbon nanotubes, metals, nanocellulose, and nanocrystals, enhance graphene's dispersibility and create new value in nanocomposites. Graphene's exceptional properties make it applicable in the medical, electronics, and tire industries. Optimizing graphene incorporation is crucial to exploit its benefits. Response surface methodology (RSM) optimizes graphene nanocomposites effectively and efficiently, surpassing traditional methods. The review discusses recent advancements in graphene modification, hybridization, and applications in rubber products. Furthermore, RSM utilization for optimizing graphene–rubber nanocomposites is explored. The paper concludes with future prospects for graphene in rubber formulations.

石墨烯被广泛掺入橡胶基体中,以增强纳米复合材料的机械、电学和热学性能。然而,其疏水性和缺乏功能性会导致团聚,影响纳米复合材料的性能。机械共混、研磨和超声处理等剧烈搅拌技术修饰石墨烯,破坏石墨烯片之间的π–π相互作用。混合填料,如碳纳米管、金属、纳米纤维素和纳米晶体,增强了石墨烯的分散性,并在纳米复合材料中创造了新的价值。石墨烯的特殊性能使其适用于医疗、电子和轮胎行业。优化石墨烯的掺入对于利用其优势至关重要。响应面法(RSM)有效地优化了石墨烯纳米复合材料,超越了传统方法。综述了石墨烯改性、杂化及其在橡胶制品中的应用的最新进展。此外,还探索了RSM在优化石墨烯-橡胶纳米复合材料中的应用。文章最后对石墨烯在橡胶配方中的应用前景进行了展望。
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引用次数: 0
Protein crystallisation with gas microbubbles as soft template in a microfluidic device 微流体装置中以气体微泡为软模板的蛋白质结晶
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-08-18 DOI: 10.1039/D3ME00058C
Wenqing Tian, Oladayo Ogunyinka, Charlie Oretti, H. C. Hemaka Bandulasena, Chris Rielly and Huaiyu Yang

Lysozyme crystallisation was first-time performed in a microfluidic device in the presence of different gases: helium, nitrogen, oxygen, and carbon dioxide microbubbles. It was found that protein adsorbed on the gas–liquid interface stabilised the gas bubbles in the aqueous solution, and bubble stability increased with the protein concentration in the solution. The heterogeneous nucleation of protein on the gas–liquid interface was preferred than on the capillary glass wall, limiting the fouling inside the capillary. The crystals formed with curved surfaces, and the crystals floated in the solution with gas bubbles. The population density of lysozyme crystals increased with an increase in the solubility of four types of gases. Three stages of the protein crystallisation on the gas–liquid, gas–solid and liquid–solid interfaces were discussed.

溶菌酶结晶首次在微流体装置中在不同气体(氦气、氮气、氧气和二氧化碳微气泡)的存在下进行。研究发现,吸附在气液界面上的蛋白质稳定了水溶液中的气泡,并且气泡的稳定性随着溶液中蛋白质浓度的增加而增加。蛋白质在气液界面上的非均匀成核比在毛细管玻璃壁上的成核更可取,从而限制了毛细管内的污垢。晶体的表面是弯曲的,晶体在溶液中漂浮着气泡。溶菌酶晶体的群体密度随着四种气体溶解度的增加而增加。讨论了蛋白质在气液界面、气固界面和液固界面上结晶的三个阶段。
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引用次数: 0
New Editor-in-Chief and Deputy Editor-in-Chief for MSDE: reflections and vision MSDE新主编、副主编:反思与展望
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-08-07 DOI: 10.1039/D3ME90026F
Claire S. Adjiman and Andrew L. Ferguson

A graphical abstract is available for this content

此内容的图形摘要可用
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引用次数: 0
Effect of intra-cyclohexane rings in H-shaped reactive molecules on the negative dispersion of optical retardation† H型反应分子中环己烷内环对光学延迟负色散的影响†
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-07-28 DOI: 10.1039/D3ME00089C
Hoai Thu Luong, Ja Won Kim, Jiyun Lee, Yi Young Kang, Yumi Cho, Jae-Won Ka, Sang Kyu Kwak and Ji-Hoon Lee

Artificial materials which show negative dispersion of retardation are of great importance and interest for applications to geometric phase retarders, compensation films, and augmented reality. Nevertheless, few negative dispersion materials have been reported and the exact correlation between the dispersion and the molecular structure has not been clearly elucidated yet. Here, new H-shaped reactive molecules with different chemical structures were synthesized and an early conversion from positive to negative dispersion of retardation was observed. The effect of the molecular structure on the dispersion of retardation was investigated experimentally as well as theoretically from the view point of molecular orientation and intrinsic molecular refractive index dispersion. The cyclohexane-inserted H-shaped reactive molecule represented a better planar orientation where the central linkage groups are aligned parallel to the surface plane. The relative UV absorption intensity along the long molecular axis was reduced compared to that of the molecule without a cyclohexane ring, while the absorption peak wavelength was not changed. By these two effects, the conversion from positive to negative dispersion could be shown at a lower concentration of the H-shaped molecules.

显示负色散延迟的人造材料在几何相位延迟器、补偿膜和增强现实中的应用具有重要意义和兴趣。然而,很少有负分散体材料被报道,并且分散体与分子结构之间的确切相关性尚未明确阐明。在这里,合成了具有不同化学结构的新的H形反应分子,并观察到延迟从正分散到负分散的早期转化。从分子取向和本征分子折射率色散的角度,从实验和理论上研究了分子结构对延迟色散的影响。插入环己烷的H形反应分子表现出更好的平面取向,其中中心连接基团平行于表面平面排列。与没有环己烷环的分子相比,沿长分子轴的相对UV吸收强度降低,而吸收峰波长没有改变。通过这两种效应,可以在较低浓度的H型分子下显示从正分散体到负分散体的转化。
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引用次数: 0
Studies on the stereochemical behaviors of a winding vine-shaped molecular wire of a bithiophene dimer with molecular asymmetry† 具有分子不对称性的双噻吩二聚体缠绕藤状分子丝的立体化学行为研究†
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-07-06 DOI: 10.1039/D3ME00106G
Kohei Hosokawa, Kohei Tabuchi, Yuki Nakanishi, Kentaro Okano, Masaki Horie and Atsunori Mori

Multiple ring-closing metathesis of oligomeric bithiophene smoothly formed a winding vine-shaped oligomer with molecular asymmetry. Stereochemical studies suggested that the dimeric 1 : 1 meso and racemic stereochemical mixture showed the conversion to a meso-enriched product upon standing in the solid state, while the obtained meso compound reverted to the meso and racemic mixture upon heating the solution in chloroform at 50 °C for 30 min. On the other hand, heating of the meso isomer in the solid state at 80 °C for 3 days did not lead to isomerization.

低聚二噻吩的多次闭环复分解顺利形成了具有分子不对称性的缠绕藤状低聚物。立体化学研究表明,二聚体1 : 1中消旋和外消旋立体化学混合物在固态下静置时显示转化为富含中消旋的产物,而在50°C的氯仿溶液中加热30分钟后,获得的中消旋化合物还原为中消旋和消旋混合物。另一方面,在80°C的固态下加热中消旋异构体3天不会导致异构化。
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引用次数: 0
Outstanding Reviewers for Molecular Systems Design & Engineering in 2022 2022年分子系统设计与工程杰出评审员
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-07-06 DOI: 10.1039/D3ME90022C

A graphical abstract is available for this content

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引用次数: 0
Accurate calculation of second osmotic virial coefficients of proteins using mixed Poisson–Boltzmann and extended DLVO theory† 用混合泊松-玻尔兹曼和扩展DLVO理论精确计算蛋白质的二次渗透病毒系数
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-07-03 DOI: 10.1039/D3ME00086A
Srdjan Pusara, Wolfgang Wenzel and Mariana Kozlowska

The state of proteins in aqueous solution is determined by weak, nonspecific interactions affected by pH, solvent composition, and ionic strength. Protein–protein interactions play a crucial role in determining protein stability and solubility. The second osmotic coefficient (B22) provides insight into effective interactions between proteins in solution. Models for calculating B22 are valuable for estimating interactions, explaining measured phenomena, and reducing experimental time. However, existing models, like the Derjaguin–Landau–Verwey–Overbeek (DLVO) theory, assume a simple spherical shape for proteins. Owing to the fact that proteins exhibit diverse shapes and charge distributions, influencing their electrostatic properties and overall interactions, DLVO accuracy is significantly reduced for nonspherical proteins. To address this limitation, we introduce the xDLVO-CGhybr model, which combines Poisson–Boltzmann (PB) and Debye–Hückel (DH) theories to account for electrostatic interactions between proteins. PB is used for short intermolecular distances (<2 nm) with an all-atom resolution, while DH is employed for longer distances on a coarse-grained level. Additionally, xDLVO-CGhybr incorporates an improved coarse-grained Lennard-Jones (LJ) potential derived directly from the all-atom potential to capture dispersion interactions. This model improves the calculated B22 values compared to existing models and can be applied to proteins with arbitrary shape and charge under various solvent conditions (up to 1 M monovalent salt concentration). We demonstrate the application of xDLVO-CGhybr to bovine trypsin inhibitor, ribonuclease A, chymotrypsinogen, concanavalin A, bovine serum albumin, and human immunoglobulin type I proteins, validating the model against experimental data.

蛋白质在水溶液中的状态是由受pH值、溶剂组成和离子强度影响的弱、非特异性相互作用决定的。蛋白质之间的相互作用在决定蛋白质的稳定性和溶解度方面起着至关重要的作用。第二渗透系数(B22)提供了对溶液中蛋白质之间有效相互作用的洞察。计算B22的模型对于估计相互作用、解释测量现象和减少实验时间是有价值的。然而,现有的模型,如Derjaguin-Landau-Verwey-Overbeek (DLVO)理论,假设蛋白质是一个简单的球形。由于蛋白质具有不同的形状和电荷分布,这影响了它们的静电特性和整体相互作用,因此对于非球形蛋白质,DLVO精度显着降低。为了解决这一限制,我们引入了xDLVO-CGhybr模型,该模型结合了泊松-玻尔兹曼(PB)和德拜- h ckel (DH)理论来解释蛋白质之间的静电相互作用。PB用于全原子分辨率的短分子间距离(2nm),而DH用于较长距离的粗粒度水平。此外,xDLVO-CGhybr结合了一个改进的粗粒度Lennard-Jones (LJ)势,直接来自全原子势,以捕获色散相互作用。与现有模型相比,该模型改进了计算的B22值,并可应用于各种溶剂条件下(高达1 M单价盐浓度)具有任意形状和电荷的蛋白质。我们展示了xDLVO-CGhybr在牛胰蛋白酶抑制剂、核糖核酸酶A、糜凝胰蛋白酶原、豆豆蛋白A、牛血清白蛋白和人免疫球蛋白I型蛋白上的应用,并根据实验数据验证了该模型。
{"title":"Accurate calculation of second osmotic virial coefficients of proteins using mixed Poisson–Boltzmann and extended DLVO theory†","authors":"Srdjan Pusara, Wolfgang Wenzel and Mariana Kozlowska","doi":"10.1039/D3ME00086A","DOIUrl":"https://doi.org/10.1039/D3ME00086A","url":null,"abstract":"<p >The state of proteins in aqueous solution is determined by weak, nonspecific interactions affected by pH, solvent composition, and ionic strength. Protein–protein interactions play a crucial role in determining protein stability and solubility. The second osmotic coefficient (<em>B</em><small><sub>22</sub></small>) provides insight into effective interactions between proteins in solution. Models for calculating <em>B</em><small><sub>22</sub></small> are valuable for estimating interactions, explaining measured phenomena, and reducing experimental time. However, existing models, like the Derjaguin–Landau–Verwey–Overbeek (DLVO) theory, assume a simple spherical shape for proteins. Owing to the fact that proteins exhibit diverse shapes and charge distributions, influencing their electrostatic properties and overall interactions, DLVO accuracy is significantly reduced for nonspherical proteins. To address this limitation, we introduce the xDLVO-CGhybr model, which combines Poisson–Boltzmann (PB) and Debye–Hückel (DH) theories to account for electrostatic interactions between proteins. PB is used for short intermolecular distances (&lt;2 nm) with an all-atom resolution, while DH is employed for longer distances on a coarse-grained level. Additionally, xDLVO-CGhybr incorporates an improved coarse-grained Lennard-Jones (LJ) potential derived directly from the all-atom potential to capture dispersion interactions. This model improves the calculated <em>B</em><small><sub>22</sub></small> values compared to existing models and can be applied to proteins with arbitrary shape and charge under various solvent conditions (up to 1 M monovalent salt concentration). We demonstrate the application of xDLVO-CGhybr to bovine trypsin inhibitor, ribonuclease A, chymotrypsinogen, concanavalin A, bovine serum albumin, and human immunoglobulin type I proteins, validating the model against experimental data.</p>","PeriodicalId":91,"journal":{"name":"Molecular Systems Design & Engineering","volume":" 9","pages":" 1203-1219"},"PeriodicalIF":3.6,"publicationDate":"2023-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.rsc.org/en/content/articlepdf/2023/me/d3me00086a?page=search","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3784859","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cationic and radical polymerization using a boron–thienothiophene–triphenylamine based D–π–A type photosensitizer under white LED irradiation†‡ 在白色LED照射下使用硼-噻吩并噻吩并三苯胺基D–π–a型光敏剂进行阳离子和自由基聚合†
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-07-03 DOI: 10.1039/D3ME00083D
Ali Suerkan, Recep Isci, Turan Ozturk and Yusuf Yagci

A donor–π–acceptor type photoinitiator, composed of boron–thienothiophene–triphenylamine (DMB–TT–TPA) to be used as a synthesizer under white LED irradiation, was studied for cationic and radical polymerization of mono and difunctional monomers. The monomers methyl methacrylate (MMA), styrene (Sty), cyclohexene oxide (CHO), isobutyl vinyl ether (IBVE), triethylene glycol dimethacrylate (TEGDMA) and bisphenol A diglycidyl ether (BADGE) were exposed to irradiation under a white LED source in CH2Cl2 with DMB–TT–TPA, in the presence of diphenyliodonium hexafluorophosphate (DPI). Of the spectroscopic techniques, fluorescence was used to investigate the photophysical characteristics of DMB–TT–TPA to gather data that would be helpful in affirming the initiation process. The presence of the synthesizer in all the polymer structures was proved by NMR spectroscopy studies. The importance of the described photoinduced electron transfer process with respect to the initiation of radical and cationic polymerizations and formation of conjugated polymers was demonstrated.

研究了一种由硼-噻吩并噻吩并三苯胺(DMB–TT–TPA)组成的供体-π-受体型光引发剂在白光LED照射下用作合成剂,用于单官能和双官能单体的阳离子和自由基聚合。单体甲基丙烯酸甲酯(MMA)、苯乙烯(Sty)、氧化环己烯(CHO)、异丁基乙烯基醚(IBVE)、二甲基丙烯酸三乙二醇酯(TEGDMA)和双酚A二缩水甘油醚(BADGE)在具有DMB–TT–TPA的CH2Cl2中的白色LED源下,在六氟磷酸二苯碘(DPI)的存在下,暴露于辐射下。在光谱技术中,荧光用于研究DMB–TT–TPA的光物理特性,以收集有助于确认引发过程的数据。NMR波谱研究证明了在所有聚合物结构中都存在合成器。证明了所描述的光诱导电子转移过程对引发自由基和阳离子聚合以及形成共轭聚合物的重要性。
{"title":"Cationic and radical polymerization using a boron–thienothiophene–triphenylamine based D–π–A type photosensitizer under white LED irradiation†‡","authors":"Ali Suerkan, Recep Isci, Turan Ozturk and Yusuf Yagci","doi":"10.1039/D3ME00083D","DOIUrl":"https://doi.org/10.1039/D3ME00083D","url":null,"abstract":"<p >A donor–π–acceptor type photoinitiator, composed of boron–thienothiophene–triphenylamine (<strong>DMB–TT–TPA</strong>) to be used as a synthesizer under white LED irradiation, was studied for cationic and radical polymerization of mono and difunctional monomers. The monomers methyl methacrylate (MMA), styrene (Sty), cyclohexene oxide (CHO), isobutyl vinyl ether (IBVE), triethylene glycol dimethacrylate (TEGDMA) and bisphenol A diglycidyl ether (BADGE) were exposed to irradiation under a white LED source in CH<small><sub>2</sub></small>Cl<small><sub>2</sub></small> with <strong>DMB–TT–TPA</strong>, in the presence of diphenyliodonium hexafluorophosphate (DPI). Of the spectroscopic techniques, fluorescence was used to investigate the photophysical characteristics of <strong>DMB–TT–TPA</strong> to gather data that would be helpful in affirming the initiation process. The presence of the synthesizer in all the polymer structures was proved by NMR spectroscopy studies. The importance of the described photoinduced electron transfer process with respect to the initiation of radical and cationic polymerizations and formation of conjugated polymers was demonstrated.</p>","PeriodicalId":91,"journal":{"name":"Molecular Systems Design & Engineering","volume":" 10","pages":" 1319-1326"},"PeriodicalIF":3.6,"publicationDate":"2023-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41084768","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Design of biomaterials through direct ring-opening metathesis polymerisation of functionalised cyclic alkenes 通过功能化环烯烃直接开环复分解聚合设计生物材料
IF 3.6 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Pub Date : 2023-06-30 DOI: 10.1039/D3ME00063J
Shingo Kobayashi and Masaru Tanaka

Ring-opening metathesis polymerisation (ROMP) has become a popular method for synthesising complex functional polymers owing to the high functional group tolerance of metathesis catalysts. In recent years, ROMP has emerged as an indispensable approach for the design and synthesis of polymeric biomaterials, allowing for precise control of polymer structure and introduction of complex polar functional groups that are challenging to access through conventional polymerisation methods. In this review, we present examples of precision polymer synthesis with polar functional groups and their utilisation as soft-biomaterials in biotechnology and biomedical fields. Specifically, we focus on two approaches: the underexplored ROMP of functionalised monocyclic alkenes and the dominant methods of synthesising biomaterials using functionalised norbornene.

开环复分解聚合(ROMP)因其催化剂具有较高的官能团耐受性而成为合成复杂功能聚合物的常用方法。近年来,ROMP已成为设计和合成高分子生物材料不可或缺的方法,可以精确控制聚合物结构,并引入复杂的极性官能团,这是传统聚合方法难以获得的。本文综述了具有极性官能团的精密聚合物合成及其在生物技术和生物医学领域作为软生物材料的应用。具体来说,我们专注于两种方法:未充分开发的功能化单环烯烃的ROMP和使用功能化降冰片烯合成生物材料的主要方法。
{"title":"Design of biomaterials through direct ring-opening metathesis polymerisation of functionalised cyclic alkenes","authors":"Shingo Kobayashi and Masaru Tanaka","doi":"10.1039/D3ME00063J","DOIUrl":"https://doi.org/10.1039/D3ME00063J","url":null,"abstract":"<p >Ring-opening metathesis polymerisation (ROMP) has become a popular method for synthesising complex functional polymers owing to the high functional group tolerance of metathesis catalysts. In recent years, ROMP has emerged as an indispensable approach for the design and synthesis of polymeric biomaterials, allowing for precise control of polymer structure and introduction of complex polar functional groups that are challenging to access through conventional polymerisation methods. In this review, we present examples of precision polymer synthesis with polar functional groups and their utilisation as soft-biomaterials in biotechnology and biomedical fields. Specifically, we focus on two approaches: the underexplored ROMP of functionalised monocyclic alkenes and the dominant methods of synthesising biomaterials using functionalised norbornene.</p>","PeriodicalId":91,"journal":{"name":"Molecular Systems Design & Engineering","volume":" 8","pages":" 960-991"},"PeriodicalIF":3.6,"publicationDate":"2023-06-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3569789","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Molecular Systems Design & Engineering
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