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{"title":"Genetic Manipulation of Vibrio fischeri","authors":"David G. Christensen, Jovanka Tepavčević, Karen L. Visick","doi":"10.1002/cpmc.115","DOIUrl":null,"url":null,"abstract":"<p><i>Vibrio fischeri</i> is a nonpathogenic organism related to pathogenic <i>Vibrio</i> species. The bacterium has been used as a model organism to study symbiosis in the context of its association with its host, the Hawaiian bobtail squid <i>Euprymna scolopes</i>. The genetic tractability of this bacterium has facilitated the mapping of pathways that mediate interactions between these organisms. The protocols included here describe methods for genetic manipulation of <i>V. fischeri</i>. Following these protocols, the researcher will be able to introduce linear DNA via transformation to make chromosomal mutations, to introduce plasmid DNA via conjugation and subsequently eliminate unstable plasmids, to eliminate antibiotic resistance cassettes from the chromosome, and to randomly or specifically mutagenize <i>V. fischeri</i> with transposons. © 2020 Wiley Periodicals LLC.</p><p><b>Basic Protocol 1</b>: Transformation of <i>V. fischeri</i> with linear DNA</p><p><b>Basic Protocol 2</b>: Plasmid transfer into <i>V. fischeri</i> via conjugation</p><p><b>Support Protocol 1</b>: Removing FRT-flanked antibiotic resistance cassettes from the <i>V. fischeri</i> genome</p><p><b>Support Protocol 2</b>: Eliminating unstable plasmids from <i>V. fischeri</i></p><p><b>Alternate Protocol 1</b>: Introduction of exogenous DNA using a suicide plasmid</p><p><b>Alternate Protocol 2</b>: Site-specific transposon insertion using a suicide plasmid</p><p><b>Alternate Protocol 3</b>: Random transposon mutagenesis using a suicide plasmid</p>","PeriodicalId":39967,"journal":{"name":"Current Protocols in Microbiology","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2020-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cpmc.115","citationCount":"7","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Protocols in Microbiology","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cpmc.115","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 7
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Abstract
Vibrio fischeri is a nonpathogenic organism related to pathogenic Vibrio species. The bacterium has been used as a model organism to study symbiosis in the context of its association with its host, the Hawaiian bobtail squid Euprymna scolopes . The genetic tractability of this bacterium has facilitated the mapping of pathways that mediate interactions between these organisms. The protocols included here describe methods for genetic manipulation of V. fischeri . Following these protocols, the researcher will be able to introduce linear DNA via transformation to make chromosomal mutations, to introduce plasmid DNA via conjugation and subsequently eliminate unstable plasmids, to eliminate antibiotic resistance cassettes from the chromosome, and to randomly or specifically mutagenize V. fischeri with transposons. © 2020 Wiley Periodicals LLC.
Basic Protocol 1 : Transformation of V. fischeri with linear DNA
Basic Protocol 2 : Plasmid transfer into V. fischeri via conjugation
Support Protocol 1 : Removing FRT-flanked antibiotic resistance cassettes from the V. fischeri genome
Support Protocol 2 : Eliminating unstable plasmids from V. fischeri
Alternate Protocol 1 : Introduction of exogenous DNA using a suicide plasmid
Alternate Protocol 2 : Site-specific transposon insertion using a suicide plasmid
Alternate Protocol 3 : Random transposon mutagenesis using a suicide plasmid
费氏弧菌的基因操作
费氏弧菌是一种与致病性弧菌相关的非致病性生物。该细菌已被用作模式生物来研究其与宿主夏威夷短尾鱿鱼(Euprymna scolopes)之间的共生关系。这种细菌的遗传易感性促进了介导这些生物体之间相互作用的途径的绘制。这里包括的协议描述了费氏弧菌的遗传操作方法。根据这些方案,研究人员将能够通过转化引入线性DNA以产生染色体突变,通过偶联引入质粒DNA并随后消除不稳定的质粒,消除染色体上的抗生素抗性磁带,以及随机或特异性地用转座子诱变费氏弧菌。©2020 Wiley期刊有限责任公司基本方案1:用线性DNA转化V. fischeri基本方案2:通过偶联将质粒转移到V. fischeri支持方案1:从V. fischeri基因组中去除frt -侧翼抗生素耐药盒支持方案2:从V. fischeri中消除不稳定质粒替代方案1:使用自杀质粒引入外源DNA替代方案2:备选方案3:使用自杀质粒进行随机转座子突变
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