The tetrel bonding role in supramolecular aggregation of lead(II) acetate and a thiosemicarbazide derivative.

IF 1.3 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Acta crystallographica Section B, Structural science, crystal engineering and materials Pub Date : 2022-08-01 Epub Date: 2022-07-22 DOI:10.1107/S2052520622005789
Ghodrat Mahmoudi, Isabel García-Santos, Michael Pittelkow, Fadhil S Kamounah, Ennio Zangrando, Maria G Babashkina, Antonio Frontera, Damir A Safin
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引用次数: 1

Abstract

A new PbII coordination complex [PbL(OAc)], which was readily synthesized from a mixture of Pb(OAc)2·3H2O and 1-(pyridin-2-yl)benzylidene-4-phenylthiosemicarbazide (HL) is reported. The crystal structure analysis of [PbL(OAc)] showed that the PbII cation is N,N',S-chelated by the tridentate pincer-type ligand L and by the oxygen atoms of the acetate anion. In addition, the metal centre forms Pb...O and Pb...S tetrel bonds with an adjacent complex molecule, yielding a 1D zigzag polymeric chain, which is reinforced by N-H...O hydrogen bonds and π...π interactions. These chains are interlinked by C-H...py non-covalent interactions, realized between one of the acetate hydrogen atoms and the pyridine rings. According to the Hirshfeld surface analysis, the crystal packing is mainly characterized by intermolecular H...H, H...C and H...O contacts, followed by H...N, H...S, C...C, C...N, Pb...H, Pb...O and Pb...S contacts. The FTIR and 1H NMR spectra of [PbL(OAc)] testify to the deprotonation of the parent ligand HL, while the acetate ligand exhibits an anisobidentate coordination mode as established by means of single-crystal X-ray diffraction and FTIR spectroscopy. Lastly, theoretical calculations at the PBE0-D3/def2-TZVP level of theory have been used to analyze and characterize the Pb...O and Pb...S tetrel bonds observed in the crystal of [PbL(OAc)], using a combination of QTAIM (Quantum Theory of Atoms in Molecules) and NCIPlot (Non-Covalent Interaction Plot) computational tools.

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四元键在醋酸铅和氨基硫脲衍生物的超分子聚集中的作用。
以Pb(OAc)2·3H2O和1-(吡啶-2-基)苄基-4-苯基硫代氨基脲(HL)为原料,制备了一种新的PbII配合物[PbL(OAc)]。[PbL(OAc)]的晶体结构分析表明,PbII阳离子为N,N', s,由三叉钳型配体L和乙酸阴离子氧原子螯合。此外,金属中心形成Pb…O和Pb…S四萜与相邻的络合物分子结合,形成一维之字形聚合物链,由N-H…O氢键和π…π相互作用。这些链通过C-H…py非共价相互作用相互连接,这种相互作用是在一个醋酸氢原子和吡啶环之间实现的。根据Hirshfeld表面分析,晶体填料的主要特征是分子间的H…H, H…C和H…O次接触,接着是H…N、H……S, c, c, c…N、Pb、H、Pb……O和Pb…年代的联系人。[PbL(OAc)]的FTIR和1H NMR谱证实了母体配体HL的去质子化,而乙酸配体则通过单晶x射线衍射和FTIR光谱建立了异齿配位模式。最后,在理论的PBE0-D3/def2-TZVP水平上进行了理论计算,分析和表征了Pb…O和Pb…利用QTAIM(分子中原子的量子理论)和NCIPlot(非共价相互作用图)计算工具,在[PbL(OAc)]晶体中观察到S四烷基键。
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来源期刊
Acta crystallographica Section B, Structural science, crystal engineering and materials
Acta crystallographica Section B, Structural science, crystal engineering and materials CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
3.60
自引率
5.30%
发文量
0
期刊介绍: Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials publishes scientific articles related to the structural science of compounds and materials in the widest sense. Knowledge of the arrangements of atoms, including their temporal variations and dependencies on temperature and pressure, is often the key to understanding physical and chemical phenomena and is crucial for the design of new materials and supramolecular devices. Acta Crystallographica B is the forum for the publication of such contributions. Scientific developments based on experimental studies as well as those based on theoretical approaches, including crystal-structure prediction, structure-property relations and the use of databases of crystal structures, are published.
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