Left Ventricle Segmentation in Cardiac MR Images via an Improved ResUnet.

IF 3.3 Q2 ENGINEERING, BIOMEDICAL International Journal of Biomedical Imaging Pub Date : 2022-07-08 eCollection Date: 2022-01-01 DOI:10.1155/2022/8669305
Shengzhou Xu, Haoran Lu, Shiyu Cheng, Chengdan Pei
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Abstract

Cardiovascular diseases are reported as the leading cause of death around the world. Automatic segmentation of the left ventricle (LV) from magnetic resonance (MR) images is essential for an early diagnosis. An enhanced ResUnet is proposed in this paper to improve the performance of extracting LV endocardium and epicardium from MR images, improving the accuracy of the model by introducing a medium skip connection for the contracting path and a short skip connection for the residual unit. Also, a depth-wise separable convolution replaces the typical convolution operation to improve training efficiency. In the MICCAI 2009 LV segmentation challenge test dataset, the percentages of "good" contours, dice metric, and average perpendicular distance of endocardium (epicardium) are 99.12% ± 2.29%(100% ± 0%), 0.93 ± 0.02 (0.96 ± 0.01), and 1.60 ± 0.42 mm (1.37 ± 0.23 mm), respectively. Experimental results demonstrate that the proposed model obtains promising performance and outperforms state-of-the-art methods. By incorporating these various skip connections, the segmentation accuracy of the model is significantly improved, while the depth-wise separable convolution also improves the model efficiency.

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通过改进的 ResUnet 在心脏磁共振图像中进行左心室分割
据报道,心血管疾病是导致全球死亡的主要原因。从磁共振(MR)图像中自动分割左心室(LV)对于早期诊断至关重要。本文提出了一种增强型 ResUnet,以提高从磁共振图像中提取左心室心内膜和心外膜的性能,通过为收缩路径引入中跳连接和为残余单元引入短跳连接来提高模型的准确性。此外,深度可分离卷积取代了典型的卷积操作,提高了训练效率。在 MICCAI 2009 左心室分割挑战测试数据集中,"好 "轮廓百分比、骰子度量和心内膜(心外膜)平均垂直距离分别为 99.12% ± 2.29%(100% ± 0%)、0.93 ± 0.02(0.96 ± 0.01)和 1.60 ± 0.42 mm(1.37 ± 0.23 mm)。实验结果表明,所提出的模型性能良好,优于最先进的方法。通过加入这些不同的跳转连接,模型的分割精度得到了显著提高,同时深度可分离卷积也提高了模型的效率。
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来源期刊
CiteScore
12.00
自引率
0.00%
发文量
11
审稿时长
20 weeks
期刊介绍: The International Journal of Biomedical Imaging is managed by a board of editors comprising internationally renowned active researchers. The journal is freely accessible online and also offered for purchase in print format. It employs a web-based review system to ensure swift turnaround times while maintaining high standards. In addition to regular issues, special issues are organized by guest editors. The subject areas covered include (but are not limited to): Digital radiography and tomosynthesis X-ray computed tomography (CT) Magnetic resonance imaging (MRI) Single photon emission computed tomography (SPECT) Positron emission tomography (PET) Ultrasound imaging Diffuse optical tomography, coherence, fluorescence, bioluminescence tomography, impedance tomography Neutron imaging for biomedical applications Magnetic and optical spectroscopy, and optical biopsy Optical, electron, scanning tunneling/atomic force microscopy Small animal imaging Functional, cellular, and molecular imaging Imaging assays for screening and molecular analysis Microarray image analysis and bioinformatics Emerging biomedical imaging techniques Imaging modality fusion Biomedical imaging instrumentation Biomedical image processing, pattern recognition, and analysis Biomedical image visualization, compression, transmission, and storage Imaging and modeling related to systems biology and systems biomedicine Applied mathematics, applied physics, and chemistry related to biomedical imaging Grid-enabling technology for biomedical imaging and informatics
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