The Proteomic Code: a molecular recognition code for proteins.

Jan C Biro
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引用次数: 36

Abstract

Background: The Proteomic Code is a set of rules by which information in genetic material is transferred into the physico-chemical properties of amino acids. It determines how individual amino acids interact with each other during folding and in specific protein-protein interactions. The Proteomic Code is part of the redundant Genetic Code.

Review: The 25-year-old history of this concept is reviewed from the first independent suggestions by Biro and Mekler, through the works of Blalock, Root-Bernstein, Siemion, Miller and others, followed by the discovery of a Common Periodic Table of Codons and Nucleic Acids in 2003 and culminating in the recent conceptualization of partial complementary coding of interacting amino acids as well as the theory of the nucleic acid-assisted protein folding.

Methods and conclusions: A novel cloning method for the design and production of specific, high-affinity-reacting proteins (SHARP) is presented. This method is based on the concept of proteomic codes and is suitable for large-scale, industrial production of specifically interacting peptides.

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蛋白质组学密码:蛋白质的分子识别密码。
背景:蛋白质组密码是一套规则,通过这些规则,遗传物质中的信息被转移到氨基酸的物理化学性质中。它决定了单个氨基酸在折叠和特定蛋白质-蛋白质相互作用中如何相互作用。蛋白质组密码是冗余遗传密码的一部分。回顾:这一概念25年的历史,从Biro和Mekler的第一个独立建议,通过Blalock, Root-Bernstein, Siemion, Miller等人的工作,接着是2003年密码子和核酸共同周期表的发现,以及最近相互作用氨基酸部分互补编码的概念化以及核酸辅助蛋白质折叠理论。方法和结论:提出了一种设计和生产特异性高亲和反应蛋白(SHARP)的新克隆方法。该方法基于蛋白质组学编码的概念,适用于大规模工业生产特异性相互作用肽。
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Theoretical Biology and Medical Modelling
Theoretical Biology and Medical Modelling MATHEMATICAL & COMPUTATIONAL BIOLOGY-
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6-12 weeks
期刊介绍: Theoretical Biology and Medical Modelling is an open access peer-reviewed journal adopting a broad definition of "biology" and focusing on theoretical ideas and models associated with developments in biology and medicine. Mathematicians, biologists and clinicians of various specialisms, philosophers and historians of science are all contributing to the emergence of novel concepts in an age of systems biology, bioinformatics and computer modelling. This is the field in which Theoretical Biology and Medical Modelling operates. We welcome submissions that are technically sound and offering either improved understanding in biology and medicine or progress in theory or method.
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