Deep Learning Neural Network-Guided Detection of Asbestos Bodies in Bronchoalveolar Lavage Samples.

IF 1.6 4区 医学 Q3 PATHOLOGY Acta Cytologica Pub Date : 2023-01-01 Epub Date: 2023-09-19 DOI:10.1159/000534149
Antti J Hakkarainen, Reija Randen-Brady, Henrik Wolff, Mikko I Mäyränpää, Antti Sajantila
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Abstract

Introduction: Asbestos is a global occupational health hazard, and exposure to it by inhalation predisposes to interstitial as well as malignant pulmonary morbidity. Over time, asbestos fibers embedded in lung tissue can become coated with iron-rich proteins and mucopolysaccharides, after which they are called asbestos bodies (ABs) and can be detected in light microscopy (LM). Bronchoalveolar lavage, a cytological sample from the lower airways, is one of the methods for diagnosing lung asbestosis and related morbidity. Search for ABs in these samples is generally laborious and time-consuming. We describe a novel diagnostic method, which implements deep learning neural network technology for the detection of ABs in bronchoalveolar lavage samples (BALs).

Methods: BALs with suspicion of asbestos exposure were scanned as whole slide images (WSIs) and uploaded to a cloud-based virtual microscopy platform with a neural network training interface. The images were used for training and testing a neural network model capable of recognizing ABs. To prioritize the model's sensitivity, we allowed it to also make false-positive suggestions. To test the model, we compared its performance to standard LM diagnostic data as well as the ground truth (GT) number of ABs, which we established by a thorough manual search of the WSIs.

Results: We were able to reach overall sensitivity of 93.4% (95% CI: 90.3-95.7%) in the detection of ABs in comparison to their GT number. Compared to standard LM diagnostic data, our model showed equal to or higher sensitivity in most cases.

Conclusion: Our results indicate that deep learning neural network technology offers promising diagnostic tools for routine assessment of BALs. However, at this stage, a human expert is required to confirm the findings.

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深度学习神经网络引导检测支气管肺泡灌洗样本中的石棉体。
引言:石棉是一种全球性的职业健康危害,吸入石棉易导致间质性和恶性肺部疾病。随着时间的推移,嵌入肺组织中的石棉纤维可以被富含铁的蛋白质和粘多糖包裹,之后它们被称为石棉体,可以在光学显微镜中检测到。支气管肺泡灌洗是下呼吸道的细胞学样本,是诊断肺石棉肺及其相关发病率的方法之一。在这些样本中寻找石棉尸体通常既费力又耗时。我们描述了一种新的诊断方法,该方法实现了深度学习神经网络技术,用于检测支气管肺泡灌洗样本中的石棉体。方法:将疑似石棉暴露的支气管肺泡灌洗样本扫描为完整的载玻片图像,并上传到具有神经网络训练界面的基于云的虚拟显微镜平台。这些图像被用于训练和测试能够识别石棉尸体的神经网络模型。为了优先考虑模型的敏感性,我们允许它也提出假阳性建议。为了测试该模型,我们将其性能与标准光学显微镜诊断数据以及石棉体的真实数量进行了比较,这是我们通过对整个幻灯片图像进行彻底手动搜索而确定的。结果:与地面真实值相比,我们能够在石棉体检测中达到93.4%(95%CI 90.3-95.7%)的总体灵敏度。与标准的光学显微镜诊断数据相比,我们的模型在大多数情况下显示出同等或更高的灵敏度。结论:我们的研究结果表明,深度学习神经网络技术为支气管肺泡灌洗液样本的常规评估提供了有前景的诊断工具。然而,在这个阶段,需要一位人类专家来确认这些发现。
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来源期刊
Acta Cytologica
Acta Cytologica 生物-病理学
CiteScore
3.70
自引率
11.10%
发文量
46
审稿时长
4-8 weeks
期刊介绍: With articles offering an excellent balance between clinical cytology and cytopathology, ''Acta Cytologica'' fosters the understanding of the pathogenetic mechanisms behind cytomorphology and thus facilitates the translation of frontline research into clinical practice. As the official journal of the International Academy of Cytology and affiliated to over 50 national cytology societies around the world, ''Acta Cytologica'' evaluates new and existing diagnostic applications of scientific advances as well as their clinical correlations. Original papers, review articles, meta-analyses, novel insights from clinical practice, and letters to the editor cover topics from diagnostic cytopathology, gynecologic and non-gynecologic cytopathology to fine needle aspiration, molecular techniques and their diagnostic applications. As the perfect reference for practical use, ''Acta Cytologica'' addresses a multidisciplinary audience practicing clinical cytopathology, cell biology, oncology, interventional radiology, otorhinolaryngology, gastroenterology, urology, pulmonology and preventive medicine.
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