Identification of genomic alterations with clinical impact in canine splenic hemangiosarcoma.

IF 2.3 2区 农林科学 Q1 VETERINARY SCIENCES Veterinary and comparative oncology Pub Date : 2023-12-01 Epub Date: 2023-09-21 DOI:10.1111/vco.12925
Timothy Estabrooks, Anastasia Gurinovich, Jodie Pietruska, Benjamin Lewis, Garrett Harvey, Gerald Post, Lindsay Lambert, Aubrey Miller, Lucas Rodrigues, Michelle E White, Christina Lopes, Cheryl A London, Kate Megquier
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Abstract

Canine hemangiosarcoma (HSA) is an aggressive cancer of endothelial cells with short survival times. Understanding the genomic landscape of HSA may aid in developing therapeutic strategies for dogs and may also inform therapies for the rare and aggressive human cancer angiosarcoma. The objectives of this study were to build a framework for leveraging real-world genomic and clinical data that could provide the foundation for precision medicine in veterinary oncology, and to determine the relationships between genomic and clinical features in canine splenic HSA. One hundred and nine dogs with primary splenic HSA treated by splenectomy that had tumour sequencing via the FidoCure® Precision Medicine Platform targeted sequencing panel were enrolled. Patient signalment, weight, metastasis at diagnosis and overall survival time were retrospectively evaluated. The incidence of genomic alterations in individual genes and their relationship to patient variables including outcome were assessed. Somatic mutations in TP53 (n = 44), NRAS (n = 20) and PIK3CA (n = 19) were most common. Survival was associated with presence of metastases at diagnosis and germline variants in SETD2 and NOTCH1. Age at diagnosis was associated with somatic NRAS mutations and breed. TP53 and PIK3CA somatic mutations were found in larger dogs, while germline SETD2 variants were found in smaller dogs. We identified both somatic mutations and germline variants associated with clinical variables including age, breed and overall survival. These genetic changes may be useful prognostic factors and provide insight into the genomic landscape of hemangiosarcoma.

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犬脾脏血管肉瘤基因组改变与临床影响的鉴定。
犬血管肉瘤(HSA)是一种侵袭性内皮细胞癌症,生存时间短。了解HSA的基因组景观可能有助于制定狗的治疗策略,也可能为罕见和侵袭性人类癌症血管肉瘤的治疗提供信息。本研究的目的是建立一个利用真实世界基因组和临床数据的框架,为兽医肿瘤学中的精准医学提供基础,并确定犬脾脏HSA的基因组和临床特征之间的关系。通过FidoCure®Precision Medicine Platform靶向测序小组对109只接受脾切除治疗的原发性脾脏HSA犬进行了肿瘤测序。回顾性评估患者的信号、体重、诊断时的转移和总生存时间。评估了个体基因基因组改变的发生率及其与患者变量(包括结果)的关系。TP53(n = 44),NRAS(n = 20) 和PIK3CA(n = 19) 是最常见的。存活率与SETD2和NOTCH1的诊断转移和种系变异有关。诊断时的年龄与体细胞NRAS突变和品种有关。在体型较大的狗中发现了TP53和PIK3CA体细胞突变,而在体型较小的狗中则发现了种系SETD2变体。我们确定了与年龄、品种和总生存率等临床变量相关的体细胞突变和种系变异。这些基因变化可能是有用的预后因素,并为血管肉瘤的基因组景观提供见解。
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来源期刊
Veterinary and comparative oncology
Veterinary and comparative oncology 农林科学-兽医学
CiteScore
4.80
自引率
9.50%
发文量
75
审稿时长
>24 weeks
期刊介绍: Veterinary and Comparative Oncology (VCO) is an international, peer-reviewed journal integrating clinical and scientific information from a variety of related disciplines and from worldwide sources for all veterinary oncologists and cancer researchers concerned with aetiology, diagnosis and clinical course of cancer in domestic animals and its prevention. With the ultimate aim of diminishing suffering from cancer, the journal supports the transfer of knowledge in all aspects of veterinary oncology, from the application of new laboratory technology to cancer prevention, early detection, diagnosis and therapy. In addition to original articles, the journal publishes solicited editorials, review articles, commentary, correspondence and abstracts from the published literature. Accordingly, studies describing laboratory work performed exclusively in purpose-bred domestic animals (e.g. dogs, cats, horses) will not be considered.
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