THE SEQUENCE BETWEEN MITOCHONDRIAL NAD1-NAD2 GENES ARE POTENTIAL MOLECULAR MARKERS OF HARPACTORINAE PREDATORS (HETEROPTERA: REDUVIIDAE)

Q3 Agricultural and Biological Sciences journal of biopesticides Pub Date : 2022-12-01 DOI:10.57182/jbiopestic.15.2.129-135
J. John, Prathas Selvaraj, T. Pushpanathan, B. Ravichandran, S. Abdulazeez, J. Borgio
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Abstract

Assassin bugs are terrestrial predators belonging to the family Reduviidae. Among the 24 subfamilies, harparctorinae is predominant and extensively investigated for biocontrol applications compared to the others subfamilies in Reduviidae. Being natural enemies of phytophagous insects, understanding the phylogeny of these predatory bugs can precise the selection of candidates to employ in insect pest management. In addition to morphological systematics, complete mitochondrial genome sequences provide great insights into the phylogeny for resolving evolutionary complexity. Complete mitochondrial genomes of four potential predatory harpactorinae and one outgroup triatominae were retrieved from NCBI GenBank database. Comparative analysis of the five mitogenomes and the nucleotide sequence between nad1 and nad2 genes were selected as the best option to distinguish. The nucleotide sequence between nad1- nad2 are found to be biased towards A and T similar to their respective complete mitogenomes. Tajima’s test of neutrality suggest that the evolutionary selection at nad1-nad2 was parallel to the complete mitogenome and showed positive and significant (p > 0.1) with high nucleotide diversity. Unequal evolutionary rate at nad1-nad2 between lineages observed in Tajima’s relative rate test and proved the nucleotide sequences of nad1-nad2 between species are highly variable. Comparing the phylogenetic trees generated using the complete mitogenomes and nad1-nad2 genes uncovered the correlation between the trees and having identical branches with varying bootstrap values. Conventionally the highly conserved protein-coding cox1 gene is used for molecular taxonomy whereas this study provides an additional and/or a possible alternative molecular marker for genetic comparative test (the nucleotide sequence between nad1-nad2) to understand the systematics and phylogeny of Reduviidae. The significant nucleotide diversity, high genetic distance and less genetic similarity of the sequence between nad1-nad2 genes among the species studied, Agriosphodrus dohrni, Rhynocoris fuscipes, Scipinia horrida, and Velinus nodipes undoubtedly propose the possible utilization of nad1-nad2 region as distinguishable molecular marker.
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线粒体NAD1-NAD2基因序列是翅目捕食者的潜在分子标记
Assassin bugs是属于红腹蛛科的陆生食肉动物。在24个亚科中,与雷多病毒科的其他亚科相比,harpartorinae是主要的,并被广泛研究用于生物控制应用。作为植食性昆虫的天敌,了解这些捕食性昆虫的系统发育可以准确地选择用于害虫管理的候选者。除了形态学系统学之外,完整的线粒体基因组序列为解决进化复杂性提供了对系统发育的深刻见解。从NCBI GenBank数据库中检索到四种潜在的捕食性鱼叉藻和一种外群三显性的完整线粒体基因组。五个有丝分裂基因组的比较分析以及nad1和nad2基因之间的核苷酸序列被选为区分的最佳选择。nad1-nad2之间的核苷酸序列被发现偏向于A和T,类似于它们各自的完整有丝分裂基因组。Tajima的中性测试表明,nad1-nad2的进化选择与完整的有丝分裂基因组平行,并显示出阳性和显著性(p>0.05),具有高度的核苷酸多样性。在Tajima的相对速率测试中观察到谱系之间的nad1-nad2进化速率不相等,并证明了物种之间的nad2-nad2核苷酸序列是高度可变的。比较使用完整的有丝分裂基因组和nad1-nad2基因生成的系统发育树,发现了这些树与具有不同bootstrap值的相同分支之间的相关性。传统上,高度保守的编码cox1基因的蛋白质用于分子分类学,而本研究为遗传比较测试(nad1-nad2之间的核苷酸序列)提供了一个额外的和/或可能的替代分子标记,以了解红蝇科的系统学和系统发育。在所研究的物种、Agriosphodrus dohrni、Rhynocoris fuscipes、Scipinia horrida和Velinus nodipes中,nad1-nad2基因序列具有显著的核苷酸多样性、高遗传距离和较小的遗传相似性,这无疑提出了利用nad1-nad二区作为可区分分子标记的可能性。
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来源期刊
journal of biopesticides
journal of biopesticides Agricultural and Biological Sciences-Agronomy and Crop Science
CiteScore
0.80
自引率
0.00%
发文量
1
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