Publication-based analysis of miR-210 dependent biomarkers of pre-eclampsia

Q3 Agricultural and Biological Sciences Biological Communications Pub Date : 2020-06-05 DOI:10.21638/spbu03.2020.203
A. Tkachenko, R. Illarionov, E. Vashukova, A. Glotov
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引用次数: 3

Abstract

MicroRNAs (miRNAs) are potential biomarkers of most pregnancy complications. In recent years, miR-210 has been shown as one of the main biomarkers, detected at different stages of pregnancy and associated with various diseases, including pre-eclampsia (PE). However, miR-210 is not reported as a marker of PE in about half of the studies. We filtered available published RNA-seq data and miRNAs associated with PE, including or excluding miR-210, obtained from the PregMiR database. For further analysis we only considered miRNAs appearing in at least four different studies. We observed that miR-152, miR-1 and miR-193b were only detected in studies with a changed miR-210 level, whereas miR-27a, miR-29a, miR-130a and miR-519b were detected in studies without miRNA-210 differential expression. Common biomarkers of PE are miR-182, miR-126, miR-155, miR-181a, miR-18a, miR-195, miR-21, miR-223, miR-335, miR-517c, miR-518b, miR-518e and let-7f. Based on the obtained data and taking into account the direction of differential miRNA expression, it can be assumed that the most likely mechanisms of PE development in the early pregnancy stage are either upregulation of miR-210, miR-152, miR-518b and downregulation of miR-126; or upregulation of miR-126 and downregulation of miR-182 and miR-518b. Late stages of PE are determined by miR-210, miR-152, miR-518b, miR-21, miR-155, miR-181a, miR-182, miR-193b-3p, miR-517c, miR-518e (upregulation) and miR-126, miR-18a, miR-195, miR-223, let-7f (downregulation); or miR-27a, miR-29a, miR-130a and miR-519d, miR-517c, miR-518e miR-155, miR-126, miR-181a, miR-195 (upregulation) and miR-223, miR-18a, miR-182 (downregulation). The presented results allow speculation about the influence of certain miRNAs on PE development in the context of the presence or absence of miR-210 differential expression, but additional experimental studies are required to evaluate the findings.
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基于出版物的miR-210依赖性子痫前期生物标志物分析
微小RNA(miRNA)是大多数妊娠并发症的潜在生物标志物。近年来,miR-210已被证明是主要的生物标志物之一,在妊娠的不同阶段检测到,并与各种疾病相关,包括先兆子痫(PE)。然而,在大约一半的研究中,miR-210并没有被报道为PE的标志物。我们过滤了从PregMiR数据库获得的可用已发表的RNA-seq数据和与PE相关的miRNA,包括或不包括miR-210。为了进一步分析,我们只考虑了至少四项不同研究中出现的miRNA。我们观察到,miR-152、miR-1和miR-193b仅在miR-210水平变化的研究中检测到,而miR-27a、miR-29a、miR-130a和miR-519b在没有miRNA-210差异表达的研究中被检测到。PE的常见生物标志物是miR-182、miR-126、miR-155、miR-181a、miR-18a、miR-195、miR-21、miR-223、miR-335、miR-517c、miR-518b、miR-5118e和let-7f。基于所获得的数据,并考虑到miRNA差异表达的方向,可以假设妊娠早期PE发育的最可能机制是miR-210、miR-152、miR-518b的上调和miR-126的下调;或上调miR-126和下调miR-182和miR-518b。PE的晚期由miR-210、miR-152、miR-518b、miR-21、miR-155、miR-181a、miR-182、miR-193b-3p、miR-517c、miR-518e(上调)和miR-126、miR-18a、miR-195、miR-223、let-7f(下调)决定;或miR-27a、miR-29a、miR-130a和miR-519d、miR-517c、miR-518e、miR-155、miR-126、miR-181a、miR-195(上调)和miR-223、miR-18a、miR-182(下调)。所提供的结果允许在miR-210差异表达存在或不存在的情况下推测某些miRNA对PE发育的影响,但还需要额外的实验研究来评估这些发现。
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来源期刊
Biological Communications
Biological Communications Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
1.70
自引率
0.00%
发文量
21
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