Further studies on nicotianamine aminotransferase (NAAT) genes involved in biofortification in bread wheat (Triticum aestivum L.)

IF 2.2 Q3 GENETICS & HEREDITY Plant Gene Pub Date : 2023-03-01 DOI:10.1016/j.plgene.2022.100389
Tinku Gautam , Irfat Jan , Ritu Batra , Kalpana Singh , Renu Pandey , Pradeep Kumar Sharma , Harindra Singh Balyan , Pushpendra Kumar Gupta
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引用次数: 2

Abstract

Graminaceous plants take up iron (Fe) from soil using specialized chelating agents known as phytosiderophores, which largely comprise mugineic acids (MAs). Biosynthesis of MAs involves three enzymes, of which nicotianamine aminotransferase (NAAT) catalyses the key step in the synthesis of 2′-deoxymugineic acids (DMA). In the present study, a total of 24 TaNAAT genes distributed on 15 of the 21 bread wheat chromosomes were identified using the whole genome sequence. We also identified NAAT genes in diploid and tetraploid relatives of bread wheat. Two gene duplication events involving NAAT genes were also identified, one in Triticum urartu (AA) and the other in Aegilops tauschii (DD). In the promoter regions, a number of cis-regulatory elements were also identified for responses to biotic and abiotic stresses and to different developmental stages. Phylogenetic analysis using NAAT proteins of wheat and seven other plant species led to the identification of six clusters. Both in silico and qRT-PCR expression analyses indicated relatively higher expression of TaNAAT genes in shoot and root of genotypes with low Fe content. The results provided insights into the structure and function of TaNAAT genes, which may further help in planning strategies to develop high yielding wheat varieties tolerant to Fe-deficiency.

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参与面包小麦(Triticum aestivum L.)生物强化的烟酰胺氨基转移酶(NAAT)基因的进一步研究
禾本科植物使用被称为植物铁载体的特殊螯合剂从土壤中吸收铁(Fe),植物铁载体主要由木根酸(MA)组成。MAs的生物合成涉及三种酶,其中烟酰胺氨基转移酶(NAAT)催化合成2′-脱氧木甘酸(DMA)的关键步骤。在本研究中,使用全基因组序列鉴定了分布在21条面包小麦染色体中的15条染色体上的24个TaNAAT基因。我们还在面包小麦的二倍体和四倍体亲属中鉴定了NAAT基因。还发现了两个涉及NAAT基因的基因重复事件,一个在小麦(AA)中,另一个在灰山羊草(DD)中。在启动子区域,还鉴定了许多顺式调控元件,用于对生物和非生物胁迫以及不同发育阶段的反应。利用小麦和其他七种植物的NAAT蛋白进行系统发育分析,鉴定出六个聚类。计算机和qRT-PCR表达分析均表明,TaNAAT基因在低铁含量基因型的地上部和根部的表达相对较高。研究结果为TaNAAT基因的结构和功能提供了见解,这可能进一步有助于制定培育耐缺铁高产小麦品种的策略。
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来源期刊
Plant Gene
Plant Gene Agricultural and Biological Sciences-Plant Science
CiteScore
4.50
自引率
0.00%
发文量
42
审稿时长
51 days
期刊介绍: Plant Gene publishes papers that focus on the regulation, expression, function and evolution of genes in plants, algae and other photosynthesizing organisms (e.g., cyanobacteria), and plant-associated microorganisms. Plant Gene strives to be a diverse plant journal and topics in multiple fields will be considered for publication. Although not limited to the following, some general topics include: Gene discovery and characterization, Gene regulation in response to environmental stress (e.g., salinity, drought, etc.), Genetic effects of transposable elements, Genetic control of secondary metabolic pathways and metabolic enzymes. Herbal Medicine - regulation and medicinal properties of plant products, Plant hormonal signaling, Plant evolutionary genetics, molecular evolution, population genetics, and phylogenetics, Profiling of plant gene expression and genetic variation, Plant-microbe interactions (e.g., influence of endophytes on gene expression; horizontal gene transfer studies; etc.), Agricultural genetics - biotechnology and crop improvement.
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