Backbone NMR resonance assignment of the apo human Tsg101-UEV domain

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2023-02-06 DOI:10.1007/s12104-023-10119-5
Danai Moschidi, François-Xavier Cantrelle, Emmanuelle Boll, Xavier Hanoulle
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Abstract

The Endosomal Sorting Complex Required for Transport (ESCRT) pathway, through inverse topology membrane remodeling, is involved in many biological functions, such as ubiquitinated membrane receptor trafficking and degradation, multivesicular bodies (MVB) formation and cytokinesis. Dysfunctions in ESCRT pathway have been associated to several human pathologies, such as cancers and neurodegenerative diseases. The ESCRT machinery is also hijacked by many enveloped viruses to bud away from the plasma membrane of infected cells. Human tumor susceptibility gene 101 (Tsg101) protein is an important ESCRT-I complex component. The structure of the N-terminal ubiquitin E2 variant (UEV) domain of Tsg101 (Tsg101-UEV) comprises an ubiquitin binding pocket next to a late domain [P(S/T)AP] binding groove. These two binding sites have been shown to be involved both in the physiological roles of ESCRT-I and in the release of the viral particles, and thus are attractive targets for antivirals. The structure of the Tsg101-UEV domain has been characterized, using X-ray crystallography or NMR spectroscopy, either in its apo-state or bound to ubiquitin or late domains. In this study, we report the backbone NMR resonance assignments, including the proline signals, of the apo human Tsg101-UEV domain, that so far was not publicly available. These data, that are in good agreement with the crystallographic structure of Tsg101-UEV domain, can therefore be used for further NMR studies, including protein-protein interaction studies and drug discovery.

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载子人Tsg101-UEV结构域的主核磁共振分配
ESCRT (Endosomal Sorting Complex Required for Transport)通路通过逆拓扑膜重构参与多种生物学功能,如泛素化膜受体的转运和降解、多泡体(multivesular bodies, MVB)的形成和细胞分裂。ESCRT通路功能障碍与多种人类病理相关,如癌症和神经退行性疾病。ESCRT机制也被许多包膜病毒劫持,从被感染细胞的质膜上萌芽。人肿瘤易感基因101 (Tsg101)蛋白是ESCRT-I复合体的重要组成部分。Tsg101的n端泛素E2变体(UEV)结构域(Tsg101-UEV)的结构包括一个泛素结合口袋,旁边是一个晚期结构域[P(S/T)AP]结合槽。这两个结合位点已被证明参与ESCRT-I的生理作用和病毒颗粒的释放,因此是抗病毒药物的有吸引力的靶点。利用x射线晶体学或核磁共振光谱对Tsg101-UEV结构域的载脂蛋白态或与泛素或晚期结构域结合的结构进行了表征。在这项研究中,我们报道了迄今为止尚未公开的载子人类Tsg101-UEV结构域的主干核磁共振分配,包括脯氨酸信号。这些数据与Tsg101-UEV结构域的晶体结构非常吻合,因此可以用于进一步的核磁共振研究,包括蛋白质-蛋白质相互作用研究和药物发现。
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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
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