Genetic characterisation and population structure analysis of Anatolian figs (Ficus carica L.) by SSR markers

IF 2.2 4区 农林科学 Q2 HORTICULTURE Folia Horticulturae Pub Date : 2021-03-26 DOI:10.2478/fhort-2021-0005
A. Ergül, Burcu Pelin Büyük, N. Hazrati, F. Yilmaz, K. Kazan, Nur Arslan, C. Y. Özmen, Semra Aydin, M. Bakır, N. Tan, İ. Kösoğlu, F. Çobanoğlu
{"title":"Genetic characterisation and population structure analysis of Anatolian figs (Ficus carica L.) by SSR markers","authors":"A. Ergül, Burcu Pelin Büyük, N. Hazrati, F. Yilmaz, K. Kazan, Nur Arslan, C. Y. Özmen, Semra Aydin, M. Bakır, N. Tan, İ. Kösoğlu, F. Çobanoğlu","doi":"10.2478/fhort-2021-0005","DOIUrl":null,"url":null,"abstract":"Abstract The common fig (Ficus carica L.) is a tree species and is one of the oldest fruit trees cultivated in Turkey. The Western Anatolian region of Turkey produces nearly a quarter of the total dried fig production of the world. This region also harbours a rich fig germplasm. However, so far this germplasm has remained largely uncharacterised. In this study, using 14 simple sequence repeat (SSR) primer pairs, we analysed a total of 310 fig accessions from six different regions of Anatolia. In structure analyses, Western Anatolian accessions formed a group, which was correlated with their geographical distribution. In addition, 7 identical, 36 synonymous, and 22 homonymous fig accessions were identified. In multilocus lineages (MLLs) analysis a total of 54 accessions were matched to different accessions as clone assignment. The results will facilitate future germplasm management and breeding efforts in this economically important tree species by identifying genetic diversity, genetic relations and characterising the structure of studied populations and accessions.","PeriodicalId":12277,"journal":{"name":"Folia Horticulturae","volume":"33 1","pages":"49 - 78"},"PeriodicalIF":2.2000,"publicationDate":"2021-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Folia Horticulturae","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.2478/fhort-2021-0005","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"HORTICULTURE","Score":null,"Total":0}
引用次数: 5

Abstract

Abstract The common fig (Ficus carica L.) is a tree species and is one of the oldest fruit trees cultivated in Turkey. The Western Anatolian region of Turkey produces nearly a quarter of the total dried fig production of the world. This region also harbours a rich fig germplasm. However, so far this germplasm has remained largely uncharacterised. In this study, using 14 simple sequence repeat (SSR) primer pairs, we analysed a total of 310 fig accessions from six different regions of Anatolia. In structure analyses, Western Anatolian accessions formed a group, which was correlated with their geographical distribution. In addition, 7 identical, 36 synonymous, and 22 homonymous fig accessions were identified. In multilocus lineages (MLLs) analysis a total of 54 accessions were matched to different accessions as clone assignment. The results will facilitate future germplasm management and breeding efforts in this economically important tree species by identifying genetic diversity, genetic relations and characterising the structure of studied populations and accessions.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
利用SSR标记分析安纳托利亚无花果(Ficus carica L.)的遗传特征及群体结构
摘要无花果(Ficus carica L.)是土耳其栽培的一个树种,也是最古老的果树之一。土耳其安纳托利亚西部地区的无花果干产量占世界总产量的近四分之一。该地区还蕴藏着丰富的无花果种质资源。然而,到目前为止,这种种质在很大程度上还没有表现出来。在本研究中,我们使用14个简单序列重复(SSR)引物对,分析了来自安纳托利亚六个不同地区的310份无花果材料。在结构分析中,安纳托利亚西部的材料形成了一个群体,这与其地理分布有关。此外,还鉴定出7份相同、36份同义和22份同源的无花果材料。在多点谱系(MLL)分析中,共有54份材料作为克隆分配与不同的材料匹配。研究结果将通过识别遗传多样性、遗传关系和表征所研究种群和材料的结构,促进该经济重要树种未来的种质管理和育种工作。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Folia Horticulturae
Folia Horticulturae Agricultural and Biological Sciences-Horticulture
CiteScore
3.40
自引率
0.00%
发文量
13
审稿时长
16 weeks
期刊介绍: Folia Horticulturae is an international, scientific journal published in English. It covers a broad research spectrum of aspects related to horticultural science that are of interest to a wide scientific community and have an impact on progress in both basic and applied research carried out with the use of horticultural crops and their products. The journal’s aim is to disseminate recent findings and serve as a forum for presenting views as well as for discussing important problems and prospects of modern horticulture, particularly in relation to sustainable production of high yield and quality of horticultural products, including their impact on human health.
期刊最新文献
Regulation of crop load and quality in sweet cherry cv. ‘Sweet Heart’ using blossom thinning Fungicides, bio-controllers and resistance inducers affect bioactive compounds and oxidative metabolism in bell pepper plants inoculated with Phytophthora capsici Neodymium and zinc stimulate growth, biomass accumulation and nutrient uptake of lettuce plants in hydroponics Establishing native wildflower habitats in urban settings on a low budget Morphological and physiochemical changes of jojoba under water pollution stress condition
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1