T. Mikhailyuk, O. Vinogradova, A. Gromakova, K. Glaser, U. Karsten
{"title":"A Polyphasic Approach Leading to the Discovery of New Taxa of Terrestrial Cyanobacteria for the Flora of Ukraine","authors":"T. Mikhailyuk, O. Vinogradova, A. Gromakova, K. Glaser, U. Karsten","doi":"10.1615/interjalgae.v25.i4.10","DOIUrl":null,"url":null,"abstract":"Interesting morphotypes of filamentous cyanobacteria were found in the terrestrial habitats of the Kharkiv region (biological soil crusts) and in the vicinity of Kyiv (old concrete wall in the forest). Morphological and molecular characterization of four original strains revealed that they belong to the recently described genera Wilmottia Strunecky, Elster et Komarek, Pycnacronema M.D. Martins et Branco, Myxacorys Pietrasiak et J.R. Johansen and Tildeniella Mai, J.R. Johansen et Pietrasiak. All are new to the flora of Ukraine. Analysis of p-distances, the nucleotide sequence of the 16S-23S ITS region and the secondary structures of its most informative helices, were used in our phylogenetic analyses sequenicing of the 16S rRNA gene. All Ukrainian strains joined the clades of the corresponding genera with a high degree of support in the Bayesian and Maximum Likelihood analyses. However, their species-level identification gave ambiguous results. Reliable result was obtained only for the strain of genus Wilmottia. It was identified as Wilmottia murrayi (W. et G.S.West) Strunecky, Elster et Komarek. This is the first morphologically and molecularly confirmed record of this species in Europe. Two strains were identified as Pycnacronema cf. caatingensis and Tildeniella cf. torsiva due to their deviations from these species both in morphology and the 16S-23S ITS secondary structures. In the 16S rRNA gene-based phylogenetic analysis, the original strain of the genus Myxacorys took separate position among the known species of this genus and also had a number of morphological differences from them. Therefore, it might represent a new species, but this cannot be proven due to the lack of a 16S-23S ITS sequence of the original strain. Detailed description of the studied strains morphology with tabular review of corresponding species are given here.\n","PeriodicalId":39315,"journal":{"name":"International Journal on Algae","volume":"1 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal on Algae","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1615/interjalgae.v25.i4.10","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0
Abstract
Interesting morphotypes of filamentous cyanobacteria were found in the terrestrial habitats of the Kharkiv region (biological soil crusts) and in the vicinity of Kyiv (old concrete wall in the forest). Morphological and molecular characterization of four original strains revealed that they belong to the recently described genera Wilmottia Strunecky, Elster et Komarek, Pycnacronema M.D. Martins et Branco, Myxacorys Pietrasiak et J.R. Johansen and Tildeniella Mai, J.R. Johansen et Pietrasiak. All are new to the flora of Ukraine. Analysis of p-distances, the nucleotide sequence of the 16S-23S ITS region and the secondary structures of its most informative helices, were used in our phylogenetic analyses sequenicing of the 16S rRNA gene. All Ukrainian strains joined the clades of the corresponding genera with a high degree of support in the Bayesian and Maximum Likelihood analyses. However, their species-level identification gave ambiguous results. Reliable result was obtained only for the strain of genus Wilmottia. It was identified as Wilmottia murrayi (W. et G.S.West) Strunecky, Elster et Komarek. This is the first morphologically and molecularly confirmed record of this species in Europe. Two strains were identified as Pycnacronema cf. caatingensis and Tildeniella cf. torsiva due to their deviations from these species both in morphology and the 16S-23S ITS secondary structures. In the 16S rRNA gene-based phylogenetic analysis, the original strain of the genus Myxacorys took separate position among the known species of this genus and also had a number of morphological differences from them. Therefore, it might represent a new species, but this cannot be proven due to the lack of a 16S-23S ITS sequence of the original strain. Detailed description of the studied strains morphology with tabular review of corresponding species are given here.
在哈尔科夫地区的陆地栖息地(生物土壤外壳)和基辅附近(森林中的旧混凝土墙)发现了有趣的丝状蓝藻形态类型。四个原始菌株的形态和分子特征表明,它们属于最近描述的Wilmottia Strunecky属、Elster et Komarek属、Pycnacronema M.D.Martins et Branco属、Myxacorys Pietriak et J.R.Johansen属和Tildeniella Mai属、J.R.Johannsen et Pietriaak属。所有这些对乌克兰植物群来说都是新的。在我们对16S rRNA基因序列的系统发育分析中,使用了对p距离、16S-23S ITS区的核苷酸序列及其信息量最大的螺旋的二级结构的分析。所有乌克兰菌株都加入了相应属的分支,在贝叶斯和最大似然分析中得到了高度支持。然而,它们在物种层面的鉴定给出了模棱两可的结果。仅对威尔莫特属菌株获得了可靠的结果。它被鉴定为Wilmottia murrayi(W.et G.S.West)Strunecky、Elster et Komarek。这是该物种在欧洲的第一个形态和分子上得到证实的记录。由于两个菌株在形态和16S-23S ITS二级结构上都与这两个物种存在偏差,因此被鉴定为Pycnacronema cf.caatingensis和Tildeniella cf.torsiva。在基于16S rRNA基因的系统发育分析中,Myxacorys属的原始菌株在该属的已知物种中处于不同的位置,并且与它们存在许多形态差异。因此,它可能代表一个新物种,但由于缺乏原始菌株的16S-23S ITS序列,这一点无法得到证实。本文对所研究菌株的形态进行了详细描述,并对相应物种进行了列表回顾。
期刊介绍:
The algae are heterogeneous assemblage of phytosynthetic organisms, one of the most vast and diverse groups of ancient photoautotrophic pro- and eukaryotic organisms (about 30 000 known species). They are micro- and macroscopic, unicellular, colonial, or multicellular, mobile and immobile, attached and free-living. Algae are widespread in water and soil habitats, at different geographic latitudes, and on all continents. They occur in waters with different degrees of salinity, trophicity, organic matter, and hydrogen ions, and at various temperatures. They include planktonic, periphytonic and benthic organisms. Algae are unique model organisms in evolutionary biology and also are used in various genetic, physiological, biochemical, cytological, and other investigations.