Reconstructing Phylogenies of Alocasia spp. (Araceae) Distributed in Indonesia for Conservation Prioritization

Q4 Agricultural and Biological Sciences Journal of Tropical Life Science Pub Date : 2022-10-14 DOI:10.11594/jtls.12.03.04
N. Asih, I. Erlinawati, Arief Priyadi
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引用次数: 1

Abstract

Phylogenetic analysis is beneficial to plant conservation prioritization. Conservation does not only deal with species but also their evolutionary potential. A phylogenetic tree is usually reconstructed by using the alignment of DNA sequences. However, with the availability of megatrees, subsetting with a list of species of concern is possible. Here we reconstructed a list of 53 Alocasia spp. (Araceae) from Indonesia and adjacent regions using available megatrees and publicly available DNA sequences in the GenBank. The result showed placed and unplaced Alocasia spp. on the terminal nodes of reconstructed phylogenetic trees. The unplaced species show that publicly available DNA sequences are not yet available, therefore should be prioritized for sequencing. The placed species in the phylogeny could be used for conservation prioritization of these Alocasia spp. Keywords: Alocasia, Indonesia, Megatree, Phylogeny, Plant conservation
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重建分布在印度尼西亚的Alocasia spp.(天南星科)的系统发育以进行优先保护
系统发育分析有利于植物保护的优先顺序。保护不仅涉及物种,还涉及它们的进化潜力。系统发育树通常是通过DNA序列的比对来重建的。然而,有了巨树的存在,就有可能列出一份令人关注的物种清单。在这里,我们使用GenBank中可用的巨树和公开可用的DNA序列重建了来自印度尼西亚和邻近地区的53个Alocasia spp.(天南星科)的列表。结果显示,在重建的系统发育树的末端节点上放置和未放置Alocasia spp。未定位物种表明,公开可用的DNA序列尚不可用,因此应优先进行测序。系统发育中的放置物种可用于这些Alocasia spp.的优先保护。关键词:Alocasia,印度尼西亚,Megatree,系统发育,植物保护
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来源期刊
Journal of Tropical Life Science
Journal of Tropical Life Science Environmental Science-Ecology
CiteScore
1.00
自引率
0.00%
发文量
46
审稿时长
12 weeks
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