{"title":"Detection of Escherichia Coli Bacteria by Using Image Processing Techniques","authors":"Fatih Karatepe, Büşra Taş, O. Coskun, M. Kahriman","doi":"10.46300/91011.2022.16.31","DOIUrl":null,"url":null,"abstract":"Recently, image processing has proven itself as a fast and reliable technique in research in medicine and biology. Bacterial colony separation is an important and time-consuming process in studies in the field of microbiology. Bacteria counting is usually carried out by the naked eye or even by Coulter counter machines, which are based on the rather expensive electric field measurement method. In this study, image-based enumeration of Escherichia Coli over the colony morphology in the petri dish was investigated. In the experimental study, 4 different bacteria from the Enterobacteriaceae family were planted on petri dishes containing Eosin-methylene blue agar (Merck, Darmstadt, Germany). Escherichia Coli colony characteristics were determined by digitizing planted bacterial petri images. For the study, counting was done with the interface developed in MATLAB R2013a. After the classification criteria were determined, the method was tested on new petri dishes and successful results were obtained.","PeriodicalId":53488,"journal":{"name":"International Journal of Biology and Biomedical Engineering","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Biology and Biomedical Engineering","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.46300/91011.2022.16.31","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0
Abstract
Recently, image processing has proven itself as a fast and reliable technique in research in medicine and biology. Bacterial colony separation is an important and time-consuming process in studies in the field of microbiology. Bacteria counting is usually carried out by the naked eye or even by Coulter counter machines, which are based on the rather expensive electric field measurement method. In this study, image-based enumeration of Escherichia Coli over the colony morphology in the petri dish was investigated. In the experimental study, 4 different bacteria from the Enterobacteriaceae family were planted on petri dishes containing Eosin-methylene blue agar (Merck, Darmstadt, Germany). Escherichia Coli colony characteristics were determined by digitizing planted bacterial petri images. For the study, counting was done with the interface developed in MATLAB R2013a. After the classification criteria were determined, the method was tested on new petri dishes and successful results were obtained.
期刊介绍:
Topics: Molecular Dynamics, Biochemistry, Biophysics, Quantum Chemistry, Molecular Biology, Cell Biology, Immunology, Neurophysiology, Genetics, Population Dynamics, Dynamics of Diseases, Bioecology, Epidemiology, Social Dynamics, PhotoBiology, PhotoChemistry, Plant Biology, Microbiology, Immunology, Bioinformatics, Signal Transduction, Environmental Systems, Psychological and Cognitive Systems, Pattern Formation, Evolution, Game Theory and Adaptive Dynamics, Bioengineering, Biotechnolgies, Medical Imaging, Medical Signal Processing, Feedback Control in Biology and Chemistry, Fluid Mechanics and Applications in Biomedicine, Space Medicine and Biology, Nuclear Biology and Medicine.